Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 629 a.a., dipeptide ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  683 bits (1762), Expect = 0.0
 Identities = 362/604 (59%), Positives = 450/604 (74%), Gaps = 9/604 (1%)

Query: 15  VLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRESS 74
           V+ + ++T +F         VRD+S  V  GET+AIVGESGSGKSVTSL++MRL++    
Sbjct: 19  VVDIDSMTVAFRRGETTFNAVRDLSLTVDRGETLAIVGESGSGKSVTSLALMRLVEHGGG 78

Query: 75  RV-QGEILLGGRN-----LLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEAL 128
           ++  G I    RN     L+  S+  MR VRG ++AMIFQEPMTSLNP+FT+GDQI EA+
Sbjct: 79  KIANGSIAFRRRNGSVLDLVQASQATMRSVRGADIAMIFQEPMTSLNPVFTVGDQIGEAI 138

Query: 129 LCHQPMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLI 188
             HQ  S++EA AET+RLL+ VRIP A      YPH+ SGGMRQRVMIAMAL+ KP LLI
Sbjct: 139 ALHQNKSRSEAHAETLRLLDLVRIPEARRVAARYPHQLSGGMRQRVMIAMALSCKPSLLI 198

Query: 189 ADEPTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVG 248
           ADEPTTALDVTIQ QIL LI+ LQ+E    V+FITHDMGVVAE+ADR +VMYRG++VE G
Sbjct: 199 ADEPTTALDVTIQAQILQLIRGLQDEMNMGVIFITHDMGVVAEVADRVLVMYRGDKVEEG 258

Query: 249 ATADIFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQE--PVRPADTVDA 306
            +A +F    HPYT+ALL+AVP LGSM+G + P +F ++ T  GE  +  P   A T   
Sbjct: 259 ESAQLFAAPAHPYTKALLAAVPKLGSMQGTDAPAKFSLL-TLDGEQAKAAPEAQAQTQTQ 317

Query: 307 SAQPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGR 366
           +AQPVL+V  L  RF + SGL  +L+GRVHAVE VSFDL AGETL+LVGESGCGKSTTGR
Sbjct: 318 AAQPVLRVRDLVTRFPVRSGLFSKLTGRVHAVERVSFDLHAGETLALVGESGCGKSTTGR 377

Query: 367 AIMRLIEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEPF 426
           +++RL+E  +GS+  +G++I +L    ++ +R+ +Q IFQDPFASLNPR+TVG +I EP 
Sbjct: 378 SLLRLVESQSGSIEFDGKDISSLSGPSLQALRRDIQFIFQDPFASLNPRLTVGFSIMEPL 437

Query: 427 LEHRMGSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVAD 486
           L H + S +EA+  VA +L+KVGL  D A RYPHEFSGGQRQRI IARALAL PKV++AD
Sbjct: 438 LVHNVASGKEAQARVAWLLDKVGLPADAARRYPHEFSGGQRQRIAIARALALNPKVVIAD 497

Query: 487 ESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPR 546
           ESVSALDVS++AQ++NLMLDLQ+ L +A+LFISHDMAVVER+SHRVAVMYLG+IVEIGPR
Sbjct: 498 ESVSALDVSVQAQIVNLMLDLQRELGVAYLFISHDMAVVERISHRVAVMYLGQIVEIGPR 557

Query: 547 ADVFDNPQHDYTRKLMAAVPVPDPDRRNTRRGAANDELKSPIRPVDYTANPRAYREVSPG 606
             VF++PQH YT+KLM AVPV DP RR+ +R  A DEL SPIR +D          V P 
Sbjct: 558 RAVFESPQHPYTKKLMGAVPVADPARRHAKRMLAADELPSPIRSLDDEPVVAPLVAVGPD 617

Query: 607 HLVA 610
           H VA
Sbjct: 618 HFVA 621