Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 573 a.a., ABC transporter ATP-binding protein from Pectobacterium carotovorum WPP14

 Score =  488 bits (1257), Expect = e-142
 Identities = 261/551 (47%), Positives = 365/551 (66%), Gaps = 18/551 (3%)

Query: 26  HVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRESSRVQGEILLGGR 85
           HVD      VR ++  +  GET+A+VGESG GKS T+LS+MRL+  E  ++ G IL  G+
Sbjct: 11  HVDFPGHQAVRGLNLTINAGETLALVGESGCGKSATALSLMRLV-AEPGKISGRILFDGQ 69

Query: 86  NLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQPMSKAEARAETVR 145
           +LL+L +  MR++RGN ++MIFQEPMTSLNP+ +IG QISE L  H+ ++ A+AR   + 
Sbjct: 70  DLLTLPDRQMRQLRGNALSMIFQEPMTSLNPVLSIGQQISETLRLHEALTPAQARTRAIE 129

Query: 146 LLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADEPTTALDVTIQGQIL 205
           LL+ V+IP  A R D+YPH  SGG RQRVMIAMA+A +P+LLIADEPTTALDVTIQ QIL
Sbjct: 130 LLDLVKIPEPARRVDDYPHNLSGGQRQRVMIAMAVACRPRLLIADEPTTALDVTIQAQIL 189

Query: 206 DLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATADIF----HR--GKH 259
            L+  L+ E   S+L ITHD+G+VA+ ADR  VMY G++VE    AD+F    HR   KH
Sbjct: 190 ALLDNLRREFSMSLLLITHDLGLVAQWADRVAVMYAGQKVEEAQAADLFQSSTHRFSPKH 249

Query: 260 PYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQEPVRPADTV----DASAQPVLKVE 315
            YTR LL+    +   +         I +  T E    + P   +    D +  P+L ++
Sbjct: 250 SYTRGLLATSLHMDQDRHYRTHRLAEIHHAPTDEGFTLLTPPSLIHRATDTNQPPLLSLK 309

Query: 316 GLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGRAIMRLIEPD 375
            +  R+           G+V AV++VS  +  GETL LVGESGCGKST  + I+RL+ P 
Sbjct: 310 NIHTRYST-------AQGKVLAVDDVSLTILPGETLGLVGESGCGKSTLSKTILRLLPPS 362

Query: 376 AGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEPFLEHRMGSAR 435
            G +V +G++I TL +S ++ +R+ VQMIFQDP+ASLNPR ++   +  P + H +G   
Sbjct: 363 HGQIVFDGQDITTLKESRLKALRQRVQMIFQDPYASLNPRHSIQHILETPLIVHGLGDRS 422

Query: 436 EAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSALDVS 495
           + ++ + +++++VGL     +RYPHEFSGGQRQRI IARAL ++P +++ DE VSALDVS
Sbjct: 423 QRQQAIKNIIDRVGLPQSSLSRYPHEFSGGQRQRIGIARALVVRPSLVICDEPVSALDVS 482

Query: 496 IKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRADVFDNPQH 555
           I+AQ++NL+++L+  + L+ LFISHD+AVV  ++ RV VM  G  VE G    ++  PQH
Sbjct: 483 IQAQILNLLVELKNEMGLSLLFISHDLAVVRYIADRVMVMQNGRCVESGDHHSIWHQPQH 542

Query: 556 DYTRKLMAAVP 566
            YTRKL+ AVP
Sbjct: 543 PYTRKLIDAVP 553



 Score =  196 bits (499), Expect = 2e-54
 Identities = 109/256 (42%), Positives = 158/256 (61%), Gaps = 7/256 (2%)

Query: 15  VLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRESS 74
           +LS++N+ T +    G    V D+S  + PGET+ +VGESG GKS  S +I+RLL     
Sbjct: 305 LLSLKNIHTRYSTAQGKVLAVDDVSLTILPGETLGLVGESGCGKSTLSKTILRLLPPS-- 362

Query: 75  RVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQPM 134
              G+I+  G+++ +L E  ++ +R   V MIFQ+P  SLNP  +I   +   L+ H   
Sbjct: 363 --HGQIVFDGQDITTLKESRLKALR-QRVQMIFQDPYASLNPRHSIQHILETPLIVHGLG 419

Query: 135 SKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADEPTT 194
            +++ +     ++++V +P   S    YPH FSGG RQR+ IA AL  +P L+I DEP +
Sbjct: 420 DRSQRQQAIKNIIDRVGLPQ--SSLSRYPHEFSGGQRQRIGIARALVVRPSLVICDEPVS 477

Query: 195 ALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATADIF 254
           ALDV+IQ QIL+L+  L+ E G S+LFI+HD+ VV  IADR +VM  G  VE G    I+
Sbjct: 478 ALDVSIQAQILNLLVELKNEMGLSLLFISHDLAVVRYIADRVMVMQNGRCVESGDHHSIW 537

Query: 255 HRGKHPYTRALLSAVP 270
           H+ +HPYTR L+ AVP
Sbjct: 538 HQPQHPYTRKLIDAVP 553



 Score =  184 bits (468), Expect = 7e-51
 Identities = 109/277 (39%), Positives = 171/277 (61%), Gaps = 25/277 (9%)

Query: 309 QPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGRAI 368
           +P+L ++ L   F  H            AV  ++  + AGETL+LVGESGCGKS T  ++
Sbjct: 2   KPLLDIQDLHVDFPGHQ-----------AVRGLNLTINAGETLALVGESGCGKSATALSL 50

Query: 369 MRLI-EPD--AGSVVVNGENILTLDKSGMREMR-KTVQMIFQDPFASLNPRMTVGAAIAE 424
           MRL+ EP   +G ++ +G+++LTL    MR++R   + MIFQ+P  SLNP +++G  I+E
Sbjct: 51  MRLVAEPGKISGRILFDGQDLLTLPDRQMRQLRGNALSMIFQEPMTSLNPVLSIGQQISE 110

Query: 425 PFLEHRMGSAREAKEVVADMLNKVGLSPDMAAR---YPHEFSGGQRQRICIARALALQPK 481
               H   +  +A+    ++L+ V + P+ A R   YPH  SGGQRQR+ IA A+A +P+
Sbjct: 111 TLRLHEALTPAQARTRAIELLDLVKI-PEPARRVDDYPHNLSGGQRQRVMIAMAVACRPR 169

Query: 482 VIVADESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIV 541
           +++ADE  +ALDV+I+AQ++ L+ +L++   ++ L I+HD+ +V + + RVAVMY G+ V
Sbjct: 170 LLIADEPTTALDVTIQAQILALLDNLRREFSMSLLLITHDLGLVAQWADRVAVMYAGQKV 229

Query: 542 EIGPRADVFDN------PQHDYTRKLMAAVPVPDPDR 572
           E    AD+F +      P+H YTR L+A     D DR
Sbjct: 230 EEAQAADLFQSSTHRFSPKHSYTRGLLATSLHMDQDR 266