Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 633 a.a., dipeptide ABC transporter ATP-binding protein from Pectobacterium carotovorum WPP14

 Score =  669 bits (1725), Expect = 0.0
 Identities = 349/605 (57%), Positives = 448/605 (74%), Gaps = 7/605 (1%)

Query: 12  EDAVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDR 71
           E  V+ VRNL+  F   G     VR+++F V  GET+AIVGESGSGKSVTSL++MRL++ 
Sbjct: 22  EKRVVEVRNLSVYFEQQGQRTDAVRNLTFSVDRGETLAIVGESGSGKSVTSLALMRLVEH 81

Query: 72  ESSRV-QGEILLGGRN-----LLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQIS 125
               + QG++L   R+     L    + AMR +RG ++AMIFQEPMTSLNP+F +G+QI+
Sbjct: 82  AGGVIHQGDMLFRRRDGQVLDLRGARQRAMRTLRGADLAMIFQEPMTSLNPVFPVGEQIA 141

Query: 126 EALLCHQPMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPK 185
           E++  HQ M +  ARAET+R+L+ VRIP A +  D YPH+ SGGMRQRVMIAMAL+ KP 
Sbjct: 142 ESIRLHQGMDRRAARAETLRMLDLVRIPEARNVLDRYPHQLSGGMRQRVMIAMALSCKPS 201

Query: 186 LLIADEPTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQV 245
           LLIADEPTTALDVTIQ QIL LI+ LQ E   +V+FITHDMGVVAE+A+R +VM+RGE V
Sbjct: 202 LLIADEPTTALDVTIQAQILQLIRVLQREMEMAVIFITHDMGVVAEMAERVLVMHRGESV 261

Query: 246 EVGATADIFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQEPVRPADTVD 305
           E G+   IF   +HPYT+ LL+AVP LGSM+G+  P +FP+++  +G   + V P DTV 
Sbjct: 262 EAGSVGQIFTAPQHPYTQGLLAAVPALGSMRGQPFPEKFPLLDQRSGRIADNV-PQDTVP 320

Query: 306 ASAQPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTG 365
           A ++PVL+V  L  RF I SGLL R++ +VHAVENVSFDL  GETLSLVGESGCGKSTT 
Sbjct: 321 AQSEPVLRVSNLVTRFPIRSGLLNRVTRQVHAVENVSFDLWPGETLSLVGESGCGKSTTS 380

Query: 366 RAIMRLIEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEP 425
           RA+++L+E   G +  NG+ I  L    ++ +R+ +Q+IFQDP+ASL+PR+TVG +I EP
Sbjct: 381 RALLQLVESQKGEITFNGQRIHQLKGGALQPLRRDIQLIFQDPYASLDPRLTVGFSIMEP 440

Query: 426 FLEHRMGSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVA 485
            L H +   +EA++ V  +L++VGL P+ A RYPHEFSGGQRQR+CIARALAL PKV++A
Sbjct: 441 LLVHNICRRQEAEKRVEWLLSRVGLEPEHARRYPHEFSGGQRQRVCIARALALNPKVVIA 500

Query: 486 DESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGP 545
           DE+VSALDVSI+AQ+INLML+LQ+   +AFLFISHDMAVVER+SHRVAVMY+G+IVEIG 
Sbjct: 501 DEAVSALDVSIQAQIINLMLELQREFGIAFLFISHDMAVVERISHRVAVMYMGQIVEIGS 560

Query: 546 RADVFDNPQHDYTRKLMAAVPVPDPDRRNTRRGAANDELKSPIRPVDYTANPRAYREVSP 605
           R DVF+ P+H YTRKLM+AVPV DP RR   +    DE+ SPIR +          +V  
Sbjct: 561 RQDVFERPRHPYTRKLMSAVPVADPSRRQREQVLLVDEIPSPIRALGDEPITAPLVQVGE 620

Query: 606 GHLVA 610
            H VA
Sbjct: 621 RHFVA 625