Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 623 a.a., fused predicted peptide transport subunits of ABC superfamily: ATP-binding components (RefSeq) from Escherichia coli BW25113

 Score =  659 bits (1699), Expect = 0.0
 Identities = 354/614 (57%), Positives = 444/614 (72%), Gaps = 8/614 (1%)

Query: 3   MPQAAPLGAEDAVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTS 62
           MP +  L A + VL+V NL  +F  D      VR++SF +  GET+AIVGESGSGKSVT+
Sbjct: 1   MPHSDELDAGN-VLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTA 59

Query: 63  LSIMRLLDRESSRVQGEILL---GGRNLLSLSED---AMRRVRGNEVAMIFQEPMTSLNP 116
           L++MRLL++    VQ + +L     R ++ LSE     MR VRG ++AMIFQEPMTSLNP
Sbjct: 60  LALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNP 119

Query: 117 LFTIGDQISEALLCHQPMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMI 176
           +FT+G+QI+E++  HQ  S+ EA  E  R+L++VRIP A +    YPH+ SGGMRQRVMI
Sbjct: 120 VFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMI 179

Query: 177 AMALASKPKLLIADEPTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRT 236
           AMAL+ +P +LIADEPTTALDVTIQ QIL LIK LQ+E    V+FITHDMGVVAEIADR 
Sbjct: 180 AMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRV 239

Query: 237 VVMYRGEQVEVGATADIFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQE 296
           +VMY+GE VE G    IFH  +HPYTRALL+AVP LG+MKG + P RFP+++      Q 
Sbjct: 240 LVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQA 299

Query: 297 PVRPADTVDASAQPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGE 356
           P     TV    +PVL+V  L  RF + SGLL R++  VHAVE VSFDL  GETLSLVGE
Sbjct: 300 PPIEQKTV-VDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGE 358

Query: 357 SGCGKSTTGRAIMRLIEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRM 416
           SG GKSTTGRA++RL+E   G ++ NG+ I TL    ++ +R+ +Q IFQDP+ASL+PR 
Sbjct: 359 SGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQ 418

Query: 417 TVGAAIAEPFLEHRMGSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARAL 476
           T+G +I EP   H +   ++A   VA +L +VGL P+ A RYPHEFSGGQRQRICIARAL
Sbjct: 419 TIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARAL 478

Query: 477 ALQPKVIVADESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMY 536
           AL PKVI+ADE+VSALDVSI+ Q+INL+LDLQ+   +A+LFISHDMAVVER+SHRVAVMY
Sbjct: 479 ALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMY 538

Query: 537 LGEIVEIGPRADVFDNPQHDYTRKLMAAVPVPDPDRRNTRRGAANDELKSPIRPVDYTAN 596
           LG+IVEIGPR  VF+NPQH YTRKL+AAVPV +P R+  +R   +D+L S I        
Sbjct: 539 LGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVA 598

Query: 597 PRAYREVSPGHLVA 610
             + + V PGH VA
Sbjct: 599 AVSLQCVGPGHYVA 612