Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  617 bits (1592), Expect = 0.0
 Identities = 337/605 (55%), Positives = 428/605 (70%), Gaps = 15/605 (2%)

Query: 13  DAVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRE 72
           +A+LSV  L+  F    G   VV DISF V PG TVA+VGESGSGKSVTSLS MRL D  
Sbjct: 7   NALLSVEGLSVEF----GDSRVVDDISFRVEPGRTVAVVGESGSGKSVTSLSTMRLADMM 62

Query: 73  SSRVQ-GEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCH 131
            +    G+IL  G++LL  S+  MR +RG E+AMIFQEPMTSLNP+FTIGDQI E L+ H
Sbjct: 63  GATYPTGKILFEGKDLLKASQKEMRSIRGKEIAMIFQEPMTSLNPVFTIGDQICEVLVLH 122

Query: 132 QPMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADE 191
           + + K  A  +  +LL+ VR+P AA     YPH+ SGGMRQRVMIAMALA +PKLLIADE
Sbjct: 123 EKLGKTAAMEQAKQLLDMVRLPDAAELLHRYPHQLSGGMRQRVMIAMALACRPKLLIADE 182

Query: 192 PTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATA 251
           PTTALDVTIQ QIL++++ LQ++ G  ++FITHDMGVVAE+AD  VVM++G++VE G   
Sbjct: 183 PTTALDVTIQAQILNIMRDLQKKLGMGMVFITHDMGVVAEMADDVVVMWKGKKVEEGPVK 242

Query: 252 DIFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQEPV-----RPADTVDA 306
           DIF   +HPYTRALLSAVP LGSM+GE  P R P+     G   +PV     R  DT   
Sbjct: 243 DIFANPQHPYTRALLSAVPRLGSMEGEAFPKRLPLTVLQDG---QPVVIGEERVQDTAKY 299

Query: 307 SAQPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGR 366
             +P+L V+ L  RFDI   L G+ + R+ AV+ VSFD+ AGETL+LVGESG GKST GR
Sbjct: 300 DQKPLLSVKDLFVRFDIRKNLFGKATHRLSAVQKVSFDIHAGETLALVGESGSGKSTIGR 359

Query: 367 AIMRLIEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEPF 426
            I +L    +G +  NG +   +  +    MR+ VQ IFQDPFASL+PR TVG +IAEP 
Sbjct: 360 TIQQLQTAVSGEIAFNGRSYSQMSAAERFRMRQEVQYIFQDPFASLDPRKTVGFSIAEPI 419

Query: 427 LEHRMGSAREA-KEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVA 485
             H + + ++A +  V ++L +VGLS + AARYPHEFSGGQRQR+CIARALA  PK+I+A
Sbjct: 420 NTHGLINDQKAVRRRVDELLERVGLSSEHAARYPHEFSGGQRQRVCIARALASDPKLIIA 479

Query: 486 DESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGP 545
           DE++SALDVSI+AQ+INL +DLQ    LA+LFISHDMAVVE++SHRVAV+YLG+I+E+G 
Sbjct: 480 DEALSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVAVLYLGQIMELGS 539

Query: 546 RADVFDNPQHDYTRKLMAAVPVPDPDRRNTRRGAANDELKSPIRPVDYTANPRAYREVSP 605
           R  VF+ P HDYTR+L++AVPV DP     R      E+ +P+R V       A+ E++P
Sbjct: 540 RQQVFETPTHDYTRRLLSAVPVADPTIER-RIAMIEGEIPNPVRRVGDEPAILAHEEINP 598

Query: 606 GHLVA 610
           GH +A
Sbjct: 599 GHFIA 603