Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  469 bits (1206), Expect = e-136
 Identities = 265/557 (47%), Positives = 354/557 (63%), Gaps = 27/557 (4%)

Query: 13  DAVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRE 72
           D VLSVRNLT            V+DISFD+  GE + I+GESGSGKSVT+ +IM LL   
Sbjct: 9   DVVLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLSPV 68

Query: 73  SSRVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQ 132
            +   GEI   G ++L+  E+ +R +RG  V++IFQ+P+++LNPL T+GDQ++E L  H 
Sbjct: 69  ITVSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAHG 128

Query: 133 PMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADEP 192
             ++    A+ + LLE+V +P       +YP R SGG RQRVMIAMALA  P +LIADEP
Sbjct: 129 VGTRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADEP 188

Query: 193 TTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATAD 252
           TTALDVT Q QIL+LI+ +Q+ +  SV+FITHD GVVAEIADR VVM +G  VE G    
Sbjct: 189 TTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRADQ 248

Query: 253 IFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQEPVRPADTVDASAQPVL 312
           +     HPYT+ L++AVP    M+  ER                      ++D     VL
Sbjct: 249 VLINPVHPYTQRLVAAVP---RMRSVER----------------------SIDEEVPVVL 283

Query: 313 KVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGRAIMRLI 372
           +VE L K +   SG   R +  V AV NVSF LR G+TL +VGESG GKS+ GR +++L+
Sbjct: 284 EVENLEKEYR-SSGSFFRKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLL 342

Query: 373 EPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEPFLEHRMG 432
           +PD G++  +G +I T+D+S  R +R  +QMIFQDPFASLNPR T+G  +    L H M 
Sbjct: 343 DPDGGAIRFDGRDIATMDESAFRALRPYIQMIFQDPFASLNPRHTIGKILTVGPLAHGM- 401

Query: 433 SAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSAL 492
           +  EA+     +L  VGL      R+PHEFSGGQRQRI IARAL   P V+VADE+VSAL
Sbjct: 402 ALHEARTKALGILKLVGLDEQAYDRFPHEFSGGQRQRIGIARALMFDPVVLVADEAVSAL 461

Query: 493 DVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRADVFDN 552
           DVSI+AQV+ L+  +Q+ + +A +FI+HD+ V  ++   V VM+ G +VE GP   +F  
Sbjct: 462 DVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQGPPTKIFRA 521

Query: 553 PQHDYTRKLMAAVPVPD 569
           P H YT+KL+AA+P  D
Sbjct: 522 PTHPYTQKLVAAIPGAD 538