Pairwise Alignments

Query, 312 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 284 a.a., DNA-binding transcriptional regulator RclR from Escherichia coli ECOR27

 Score =  105 bits (261), Expect = 2e-27
 Identities = 88/304 (28%), Positives = 136/304 (44%), Gaps = 30/304 (9%)

Query: 3   DALTEMLRGLRLDGVEYGRCRLATPWATAFP--EQDAARFHFIGVGQAKLQKPSGEWLTL 60
           DAL+ +L      G     C L + W       E    R+H +  G AKL+ P+GE  TL
Sbjct: 2   DALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFTL 61

Query: 61  TCGDAVLLPRGHAHVLGSGESVTPSPFDHFGKKEVCQGVFDLQCASAGGDTVAFTASMRF 120
             G+ VLLP+  AH L            H   +  C     + C      T+    S R+
Sbjct: 62  RPGNVVLLPQNSAHRLS-----------HVDNESTC-----IVCG-----TLRLQHSARY 100

Query: 121 NMDNLHPLLQLMPDVMLTSDLAKSDPAIPHLLEAMTREVELNRVGAGGILARLADVLTAT 180
            + +L   L L P V  + +      AIP L +    E      G   + +++       
Sbjct: 101 FLTSLPETLFLAP-VNHSVEYNWLREAIPFLQQ----ESRSAMPGVDALCSQICATFFTL 155

Query: 181 LIRTWVEHGCGDSSGWLAAVRNPELGRVLAAIHLNPEKDWSVEELASLMGASRSSFAERF 240
            +R W+          L+ + +P LG V+  +   P   W+VE LAS+   SR+SFA+ F
Sbjct: 156 AVREWIAQ-VNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLF 214

Query: 241 TRVVGESPARYVVRVRMH-QARLWLREGMRVTVAAEKLGYDSEASFSRAFKRVLGAPPSQ 299
             V G +P   + ++R+   A+++ RE + V V AE +GY SE+SF +AF R  G  P +
Sbjct: 215 RDVSGTTPLAVLTKLRLQIAAQMFSREMLPVVVIAESVGYASESSFHKAFVREFGCTPGE 274

Query: 300 FRRK 303
           +R +
Sbjct: 275 YRER 278