Pairwise Alignments

Query, 261 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  199 bits (507), Expect = 8e-56
 Identities = 104/231 (45%), Positives = 156/231 (67%), Gaps = 1/231 (0%)

Query: 22  VTALSDISFSLKRGETLGLAGPSGCGKSTLARILMRLIPADEGTVRFENRDWLALGGSEL 81
           V A+  ++FSL +G+TLG+ G SG GKSTL   ++RLI + +G +RF  ++   L    +
Sbjct: 299 VKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLI-SSQGGIRFHGQNLEGLNQKAV 357

Query: 82  RAARQQMQMVFQDTHGAFNPRATVEDAISEPLRIHRIVKRRDRAAEISRLLDRVGLPAAY 141
           R  R++MQ+VFQD  G+ +PR  V D + E LRIHRI   +++ A I   L+ VGL    
Sbjct: 358 RPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQEAAIIAALEEVGLDPRT 417

Query: 142 AGRSVFELSGGQRQRVAIARAIALKPSLLILDEAVSALDVSVRRQILELLVEIQREMAIS 201
             R   E SGGQRQR+AIARA+ LKP+L++LDE  SALD +V+RQ++ELL  +Q++  ++
Sbjct: 418 RHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLT 477

Query: 202 CIFVSHDLAVIRAVCHRVAIMETGRIVEIGETGAIISAPQSSTARSLIDAA 252
            +F+SHDLAV++A+ H++ +++ G +VE G+  AI  APQ    R L++AA
Sbjct: 478 YLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAA 528



 Score =  175 bits (443), Expect = 2e-48
 Identities = 100/257 (38%), Positives = 151/257 (58%), Gaps = 8/257 (3%)

Query: 5   LLSVDGLSKTYRTGARTVTALSDISFSLKRGETLGLAGPSGCGKSTLARILMRLIPAD-- 62
           L+ V  L+  + TG +    +  +SF +++GETL L G SG GKS  A  ++RL+P    
Sbjct: 6   LIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 65

Query: 63  ---EGTVRFENRDWLALGGSELRAAR-QQMQMVFQDTHGAFNPRATVEDAISEPLRIHRI 118
               G++R+E +D L      L+  R  ++ M+FQ+   + NP   +E  I+E L +H+ 
Sbjct: 66  RHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKG 125

Query: 119 VKRRDRAAEISRLLDRVGLPAAYAGRSVF--ELSGGQRQRVAIARAIALKPSLLILDEAV 176
           +  ++  A    LLD VG+P           ELSGGQRQRV IA A+A +P LLI DE  
Sbjct: 126 LTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPT 185

Query: 177 SALDVSVRRQILELLVEIQREMAISCIFVSHDLAVIRAVCHRVAIMETGRIVEIGETGAI 236
           +ALDV+V+ +ILELL E+Q  M ++ + +SHDL ++R + HRV +M+ G+IVE  E   +
Sbjct: 186 TALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATL 245

Query: 237 ISAPQSSTARSLIDAAP 253
            S+PQ    + LI+A P
Sbjct: 246 FSSPQHHYTQMLINAEP 262