Pairwise Alignments

Query, 267 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 544 a.a., putative ABC transporter ATP-binding protein YejF from Xanthobacter sp. DMC5

 Score =  180 bits (457), Expect = 5e-50
 Identities = 107/255 (41%), Positives = 145/255 (56%), Gaps = 10/255 (3%)

Query: 6   LCRIDDLSVRYAAAD----APALRKASLTIRQGQRLAIIGESGSGKSTLGKAIAGLLP-- 59
           L  + DLSV +   D    A A++  S  + +G+ LA++GESGSGKS    ++  LLP  
Sbjct: 5   LLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKLLPYP 64

Query: 60  ARAQVSGDISWSRDSGLFTG----RPMPGRDIGTIFQDTGATLNPVLTIGEQVAEGAVRH 115
           + +  SG+I +     L       R + G +I  +FQ+  ++LNP+ TI  QV E  + H
Sbjct: 65  SASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEMLILH 124

Query: 116 LGLSWRQGRDLARDLLERVRLPHPSHLLSAYPHQLSGGQRQRVAIAAAIAARPAILIADE 175
            G+S    R    +LL  V +P P   LSAYPHQLSGGQRQRV IA A+A  P +LIADE
Sbjct: 125 RGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLLIADE 184

Query: 176 ATSALDTVTQAAIAALLDGLVREEETTLVFITHDIGLASSLADDIAVLSAGELVEHGPAR 235
            T+ALD   QA I  LL  L       ++FITHD+G+   +AD + V+  GE+VE G A 
Sbjct: 185 PTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQGGAE 244

Query: 236 RVLSAPTHPYTRTLL 250
                P HPYT+ LL
Sbjct: 245 ETFQHPRHPYTQALL 259



 Score =  147 bits (370), Expect = 6e-40
 Identities = 94/257 (36%), Positives = 137/257 (53%), Gaps = 30/257 (11%)

Query: 14  VRYAAADAPALRKASLTIRQGQRLAIIGESGSGKSTLGKAIAGLLPARAQVSGDISWSRD 73
           +R       A+   S+ IR+G+ L ++GESGSGK+TLG A+  L+ +   ++        
Sbjct: 294 LRKTVGHVKAVDGVSIAIRRGETLGVVGESGSGKTTLGLALLRLISSAGPIA-------- 345

Query: 74  SGLFTGRPMPG----------RDIGTIFQDTGATLNPVLTIGEQVAEGAVRH---LGLSW 120
              F G+P+             D+  +FQD    L+P +++ E V EG + H   L    
Sbjct: 346 ---FLGKPIDALSFKAMRPLRSDLQIVFQDPFGALSPRMSVAEIVGEGLLVHQRQLSADE 402

Query: 121 RQGRDLARDLLERVRL-PHPSHLLSAYPHQLSGGQRQRVAIAAAIAARPAILIADEATSA 179
           R  R +A   L  V L P   H    YPH+ SGGQRQR++IA A+A  P+ ++ DE TSA
Sbjct: 403 RDARVVAA--LADVGLDPETRH---RYPHEFSGGQRQRISIARAMALEPSFVVLDEPTSA 457

Query: 180 LDTVTQAAIAALLDGLVREEETTLVFITHDIGLASSLADDIAVLSAGELVEHGPARRVLS 239
           LD + QA I  LL  L ++ + T +FI+HD+ + S+LA  I V+  G++VE GPA  V  
Sbjct: 458 LDMIVQAQIVDLLRALQKKRDLTFMFISHDLRVVSALASRILVMRNGKMVEEGPAHDVFE 517

Query: 240 APTHPYTRTLLADYLDL 256
            P   YTR L A   +L
Sbjct: 518 HPKEDYTRALFAAAFNL 534