Pairwise Alignments

Query, 228 a.a., outer membrane protein from Agrobacterium fabrum C58

Subject, 212 a.a., outer membrane protein W from Escherichia coli BL21

 Score = 97.4 bits (241), Expect = 2e-25
 Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 9/177 (5%)

Query: 58  TNDSGSVDGLPGAGLSYSDTVIPELDISYFFTDNFAAELILGTTYAKINGEGVLAGTPVG 117
           T  +G   G  G G S ++     L  +Y  TDN   EL+  T +   +  G  A   + 
Sbjct: 39  TEGAGGTLGSLG-GFSVTNNTQLGLTFTYMATDNIGVELLAATPFR--HKIGTRATGDIA 95

Query: 118 KTWLLPPTLTLQYHFTDFGA-FKPYIGAGVNYSLFYNQS-----EKPGFSNLDVKNKLGA 171
               LPPTL  Q++F D  + F+PY+GAG+NY+ F++       ++ G S+L +K+  GA
Sbjct: 96  TVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGA 155

Query: 172 AVQVGFDYMLDEHWGVNFDVKKIFLKTDWTAELGGTPISGKAKLDPWLIGAGITYRF 228
           A QVG DY+++  W VN  V  + + T    +LGG       +LDPW+      YRF
Sbjct: 156 AGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF 212