Pairwise Alignments

Query, 228 a.a., outer membrane protein from Agrobacterium fabrum C58

Subject, 235 a.a., Outer membrane protein W from Azospirillum sp. SherDot2

 Score =  170 bits (431), Expect = 2e-47
 Identities = 101/235 (42%), Positives = 139/235 (59%), Gaps = 23/235 (9%)

Query: 17  MMMVNGALAADLAPLATAPTAEQAIA------AASPWMLRVRGLGVITNDSGSVDG--LP 68
           M +++ A AA LA  A    A  ++A      +A   ++R RGL V+  + G+++   L 
Sbjct: 1   MTILSRAAAALLATSALVAIASPSLAQDFKGKSAGDIVVRARGLAVLPQEKGTINNTTLG 60

Query: 69  GAGLS-YSDTVIPELDISYFFTDNFAAELILGTTYAKINGEGVLAG---TPVGKTWLLPP 124
             G +   +  IPE+D +YFFTDN AAELI GT+  ++ G  + A    T +GK  LLPP
Sbjct: 61  DVGSAKVGNDYIPEVDFTYFFTDNIAAELIAGTSRHRVKGNLIAAAGGVTEIGKVSLLPP 120

Query: 125 TLTLQYHFTDFGAFKPYIGAGVNYSLFYNQ--SEKPGFSNLDV-----KNKLGAAVQVGF 177
           TLT+QYHF       PY+GAG+NY+LFYN+  +E P    L +     KN+ G A+Q G 
Sbjct: 121 TLTVQYHFLPKERISPYVGAGINYTLFYNEDAAESPNAGGLRITDTNYKNRFGWALQAGV 180

Query: 178 DYMLDEHWGVNFDVKKIFLKTDWT--AELGGT--PISGKAKLDPWLIGAGITYRF 228
           D  L  +W +NFDVKK+FLKTD T  A LG    P++ K  LDPWL+G G+ YRF
Sbjct: 181 DVALTGNWSLNFDVKKVFLKTDVTANARLGSAVLPVTSKVTLDPWLVGVGVGYRF 235