Pairwise Alignments

Query, 278 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 277 a.a., carbohydrate ABC transporter permease from Serratia liquefaciens MT49

 Score =  145 bits (366), Expect = 9e-40
 Identities = 78/279 (27%), Positives = 152/279 (54%), Gaps = 4/279 (1%)

Query: 1   MRSKSRSLFWQKMALHATLTPLAIIWLFPLWMMFVFSTMPDYGIFSPDIVLVPSTNFMEN 60
           M ++ R     K+ ++  ++  A + LFP +   + +T     I    +     ++ +EN
Sbjct: 1   MIAEGRRFDTGKLVIYLLVSLFASLSLFPFYWSALLATQDTRSIMGMSLRF--GSHLLEN 58

Query: 61  LSNLQADTNFLRAMFISITVAVIYTVLSVFLTSMAGWALARYRFAGRRVVIAIILGTITL 120
              L+    F R++  ++ V  + T+ SV +++ AG+A + Y+F G++V+   ++ T+ +
Sbjct: 59  YRGLEQQVPFTRSLLNTLYVTAMATLTSVLVSAAAGYAFSVYQFKGKKVLFTTLMLTMMV 118

Query: 121 PFAVVVIPQFIMVAREFKLANTWIALIVPPLFNSLGVLFMRQSFSM-MPTELFDAARVEG 179
           P  V ++P F ++ +   L + + A+ +P   N  G+  +RQ  S  +P+E+ D+AR++G
Sbjct: 119 PSVVNLVPYFFVI-KSVGLLDQFAAVWLPAGVNIFGIFLVRQYVSSSLPSEILDSARMDG 177

Query: 180 VKEWQIFLRIALPLARPTMAALSIILFLASWNNYLWPLLINSRPGMMTAPVALGTLIGLT 239
           + E QIFLRI LPL RP +  ++I++ + +WNN++ PL+    P      + L +L G T
Sbjct: 178 LNELQIFLRIGLPLMRPALLTVAIVVVVDTWNNFMLPLVALQSPDKQILQLVLRSLSGAT 237

Query: 240 KVSWGGIMAGAVLLTAPILVVFVALQRHFIAGISAGAVK 278
              W  +M G+ L   P+L+ F+   +  +  ++ GAVK
Sbjct: 238 ATPWNLVMTGSFLAIVPLLIAFIFSSKQMMESLTRGAVK 276