Pairwise Alignments

Query, 274 a.a., 5-keto-4-deoxyuronate isomerase from Agrobacterium fabrum C58

Subject, 278 a.a., 5-dehydro-4-deoxy-D-glucuronate isomerase from Pectobacterium carotovorum WPP14

 Score =  239 bits (609), Expect = 6e-68
 Identities = 114/278 (41%), Positives = 172/278 (61%), Gaps = 7/278 (2%)

Query: 4   VETRQAVNPDYAKTLDTEGLRRHFLANDMFRSGEIRLIYTHYDRFVMGGAVPNGAPLTLD 63
           ++ RQ+V+ ++AKTLDT  LR+ FL   +F   +  + Y+H DR V+GG +P    +T D
Sbjct: 1   MDVRQSVHSEHAKTLDTTELRKKFLIEQIFTPNQYTMTYSHIDRIVVGGIMPVDGEITFD 60

Query: 64  KV--EETKTPSFLDRREMGIVNIGETGTVSAGDETYTLNRGDVLYLGAGSRAVTFDGA-- 119
               ++     FL+RRE+G++NIG    +     +Y +   + LY+G G++A+ F     
Sbjct: 61  DGIGKQFGVNYFLERRELGLINIGGPAKIVIDGTSYEVGNEEALYVGKGAKALAFSSLDS 120

Query: 120 ---GRFYITSCPAHRSLPAKLVSLADSKEVKLGATETSNKRTINQFIHPLVMESCQLVLG 176
               + Y  S PAH   P ++++  D+ +  LG  +T NKRTI +++ P V+E+CQL +G
Sbjct: 121 AKPAKLYYNSAPAHAVFPTRIITQDDAIKAPLGDVKTCNKRTICKYLVPEVVETCQLSMG 180

Query: 177 YTMLEDGSVWNTIPSHIHDRRMEAYLYFGMDEKSRVLHLMGEPQETRHLFISNEEGAISP 236
            T L +GS WN++P+H H+RRME Y YF M E + + H+MGEP ETRHL + NE+  ISP
Sbjct: 181 LTRLAEGSNWNSMPTHTHERRMEVYFYFDMAEDTIIFHMMGEPHETRHLVMHNEQAVISP 240

Query: 237 PWSIHSGAGIGSYTFIWAMAGDNVDYTDMDFIQPGDLK 274
            WSIH+G G  +Y FIW M G+N+ + DMD I   DL+
Sbjct: 241 SWSIHTGVGTKNYAFIWGMIGENLTFDDMDHIAMLDLR 278