Pairwise Alignments

Query, 274 a.a., 5-keto-4-deoxyuronate isomerase from Agrobacterium fabrum C58

Subject, 278 a.a., 5-keto-4-deoxyuronate isomerase (NCBI) from Escherichia coli BW25113

 Score =  253 bits (646), Expect = 3e-72
 Identities = 119/278 (42%), Positives = 177/278 (63%), Gaps = 7/278 (2%)

Query: 4   VETRQAVNPDYAKTLDTEGLRRHFLANDMFRSGEIRLIYTHYDRFVMGGAVPNGAPLTL- 62
           ++ RQ+++  +AKTLDT+GLR  FL   +F + E  ++Y+H DR ++GG +P    +++ 
Sbjct: 1   MDVRQSIHSAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDRIIVGGIMPITKTVSVG 60

Query: 63  -DKVEETKTPSFLDRREMGIVNIGETGTVSAGDETYTLNRGDVLYLGAGSRAVTFDGA-- 119
            +  ++     FL+RRE+G++NIG  GT++   + Y +   D LY+G G++ V F     
Sbjct: 61  GEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDT 120

Query: 120 ---GRFYITSCPAHRSLPAKLVSLADSKEVKLGATETSNKRTINQFIHPLVMESCQLVLG 176
               +FY    PAH + P K V+  +   V LG   TSN+RTIN++  P V+E+CQL +G
Sbjct: 121 GTPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNRRTINKYFVPDVLETCQLSMG 180

Query: 177 YTMLEDGSVWNTIPSHIHDRRMEAYLYFGMDEKSRVLHLMGEPQETRHLFISNEEGAISP 236
            T L  G++WNT+P H H+RRME Y YF MD+ + V H+MG+PQETRH+ + NE+  ISP
Sbjct: 181 LTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISP 240

Query: 237 PWSIHSGAGIGSYTFIWAMAGDNVDYTDMDFIQPGDLK 274
            WSIHSG G  +YTFIW M G+N  + DMD +   DL+
Sbjct: 241 SWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDLR 278