Pairwise Alignments

Query, 517 a.a., polygalacturonase-like protein from Agrobacterium fabrum C58

Subject, 730 a.a., glycoside hydrolase family 28 protein from Paraburkholderia sabiae LMG 24235

 Score =  112 bits (280), Expect = 5e-29
 Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 14/176 (7%)

Query: 226 RPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPESC 285
           RP  +  + C    L  +  +N   W  HP  C ++   G  + A    PN DGF+P++C
Sbjct: 385 RPCMIEFIGCTNVLLQNYHTQNTPFWQHHPTDCTNVVIDG--VFADSVGPNNDGFDPDAC 442

Query: 286 RNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQRGHGGLVIGSEMS 345
            +V++  V+F+ GDDCIA+K+GK      D      + I V++C MQ GHGGL IGSEMS
Sbjct: 443 NHVLVQNVQFNTGDDCIAIKSGKY----LDTEYGPMQNIVVQNCTMQSGHGGLTIGSEMS 498

Query: 346 GGVHDVTVEDCDMIG-------TDRGLRLKTRRGRGGMVGNITMRRV-LLDGVQTA 393
            GV +V   +  M          +  LR K+   RGG + N+ +  V L +GV  A
Sbjct: 499 AGVRNVYARNLTMQNENWASNPLNIALRFKSNMNRGGFINNVWINGVTLANGVNLA 554



 Score = 26.2 bits (56), Expect = 0.004
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 409 DWVQSRNPAPVNDG--TPFVDGITVEDVEIRN----LAHAAGVFLGLPEAPIRNIVVRNL 462
           D V + +  P NDG      + + V++V+       +A  +G +L     P++NIVV+N 
Sbjct: 423 DGVFADSVGPNNDGFDPDACNHVLVQNVQFNTGDDCIAIKSGKYLDTEYGPMQNIVVQNC 482

Query: 463 TIVS 466
           T+ S
Sbjct: 483 TMQS 486