Pairwise Alignments

Query, 517 a.a., polygalacturonase-like protein from Agrobacterium fabrum C58

Subject, 453 a.a., polygalacturonase from Agrobacterium fabrum C58

 Score =  105 bits (261), Expect = 5e-27
 Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 22/282 (7%)

Query: 109 ALENAVAAVPA--GGTLRLGPGVWTAFPVRLKSDMTLHLAEGAVLRAPSVRNRWPILPAR 166
           A++ A+ AV +  GG + L  G   +  + LKS + LHLAE AVL            P  
Sbjct: 22  AIQQAIDAVSSAGGGRVSLSAGRHVSAGLHLKSGVELHLAEDAVLA-----------PVS 70

Query: 167 DEAGRMLGSWEGLPDACFAAPVHAIGADNLVIEGRGILDGSGDK---GDWWSWPKETREG 223
           D     L     + +      + A GA N+ + G G ++  G+    GD  +        
Sbjct: 71  DYDAYALTRVSVIAEDSDRGMIIANGASNIAVTGPGRIEAGGENFIIGDDAAMGTYV-PA 129

Query: 224 ARRPRGLHLVSCHKTQLLGFTIRNAASWTIHPQGCEDLTAAGLTIIAPHDSPNTDGFNPE 283
            +RPR + L +C   +L    +  +  WT+H   CEDL    L I      PNTDG   +
Sbjct: 130 KKRPRVMVLEACRNVRLENLNVSASPMWTLHMVNCEDLHFRNLRIENDRRLPNTDGIVLD 189

Query: 284 SCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGISVRHCLMQRGHGGLVIGSE 343
           +CR  +I     S  DD I +K    GPDG+   +     I+VR C +      L +G+E
Sbjct: 190 ACRRALIEDCFISTADDGICLKT-SAGPDGK--AVGVCADITVRGCTVSSMSCALKLGTE 246

Query: 344 MSGGVHDVTVEDCDMIGTDRGLRLKTRRGRGGMVGNITMRRV 385
             G   +V  EDC ++ ++RG+ L +R   GG + NI   R+
Sbjct: 247 SFGDFTNVVFEDCKVVQSNRGIGLFSR--DGGAMRNIRFSRI 286