Pairwise Alignments

Query, 291 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 313 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  114 bits (285), Expect = 3e-30
 Identities = 83/302 (27%), Positives = 155/302 (51%), Gaps = 16/302 (5%)

Query: 2   TDAV----TAPRPGQGPQRS-PLKSVMLHTALIIASFAMLYPILWMISGSFRPQDEL-FG 55
           TDAV    + PR G+ P+++   ++++L+  L +A+   L P+  M+  S +   E+  G
Sbjct: 14  TDAVAKDLSGPR-GRKPRKTFSRRNIILYGTLFVAAAYYLLPLYVMVVTSLKGMPEIRLG 72

Query: 56  SSSLIPSAVDVGGYIRGW----TGLQVS-FGQFFWNSFFISVLATIGNVVGCSLTAFAFA 110
           +    P  +    +++ W    TGL      + FWNS  I V + + ++V  S++ +A A
Sbjct: 73  NIFAPPVEITFEPWVKAWANACTGLNCDGLSRGFWNSVRILVPSVVISIVVASVSGYAMA 132

Query: 111 RLRFGGRNFWFALMLGTLMLPYHVVLIPQYILFLEMGWVNTSLPLIVPKYLATDAFFIFL 170
             +F G   +F++++    +PY V++ P  I+  EMG   T   L++   +        L
Sbjct: 133 NWKFKGSELFFSILIIGAFIPYQVMIYPIVIVLREMGIYGTLTGLVIVHTIFGMPILTLL 192

Query: 171 MVQFFRGIPRELDEAAVMDGCSPFRIYWKIMLPLSMPVLATAAIFSFIWTWDDFFGPLIY 230
              +F  +P EL +AA +DG + ++IY++IMLP+S+P+   A I      W+DF   +++
Sbjct: 193 FRNYFASLPEELFKAARIDGANFWQIYFRIMLPMSLPIFVVAMILQVTGIWNDFLFGVVF 252

Query: 231 LNDINTYTVQLGLRSFVDST-GSSDWTSLFAMSNLS-LVPVFLFFLFFQRLLIEGIATTG 288
                 Y + + L + V+S  G  ++    A + L+  VP+ ++F+   RL + GIA   
Sbjct: 253 TRP-EYYPMTVQLNNIVNSVQGVKEYNVNMAATLLTGAVPLIVYFV-SGRLFVRGIAAGA 310

Query: 289 MK 290
           +K
Sbjct: 311 VK 312