Pairwise Alignments

Query, 357 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 371 a.a., ABC transporter nucleotide binding/ATPase (sugar) from Agrobacterium fabrum C58

 Score =  357 bits (917), Expect = e-103
 Identities = 190/342 (55%), Positives = 238/342 (69%), Gaps = 9/342 (2%)

Query: 2   GVRLNNIAKSFGSFAAIRDVSMEIPTGSFAVFVGPSGCGKSTLLRMIAGLEETSGGRIAI 61
           GV L  ++KSFG+   I D+ + I  G F VFVGPSGCGKSTLLR+IAGLEETS G I I
Sbjct: 3   GVELKGVSKSFGAVDVIHDIDLSITAGEFVVFVGPSGCGKSTLLRLIAGLEETSRGEILI 62

Query: 62  DDRDVTAVEPAERGVAMVFQNYALYPHLSVFENMAFSLRLARRPKAEVNERVGEAARILQ 121
             RDVT  +P++RG+AMVFQ+YALYPH++V +NM F LR+A RPK EV   V  AA IL 
Sbjct: 63  GGRDVTDADPSDRGIAMVFQSYALYPHMTVAQNMGFGLRMAHRPKEEVTAMVRHAAEILH 122

Query: 122 LEDHLHKKPSQLSGGQRQRVAIGRAIVRQPKVFLFDEPLSNLDAELRVQMRLELTRLHRK 181
           L   L ++P QLSGGQRQRVAIGRAIVR P+VFLFDEPLSNLDAELRV MR+E+ RLH++
Sbjct: 123 LTPLLDRRPGQLSGGQRQRVAIGRAIVRNPEVFLFDEPLSNLDAELRVGMRIEIARLHKQ 182

Query: 182 LGATMIYVTHDQVEAMTLADKIFVLKGGVVQQAGAPLTLYDDPDNRFVAGFIGSPAMNFL 241
           LG TMIYVTHDQ EAMTLADKI VL+ G ++Q G+P  LY DPDN FVAGFIGSP MNF+
Sbjct: 183 LGNTMIYVTHDQTEAMTLADKIVVLRAGRIEQIGSPFELYSDPDNLFVAGFIGSPKMNFV 242

Query: 242 QAEIVEQRNGVVTLSLDGGQRHLEARLSQPVSVGQRVEIGVRPEHLTIAQEG--ALPVNV 299
            A      +    L + G +    A    P +   ++++G+RPE+LT+ ++G   L V V
Sbjct: 243 PA-----GHEAGALVVAGHRLTFAAPAGLPTNC--QLQLGIRPENLTLTRDGERGLAVTV 295

Query: 300 EVAEELGDVSYLYTRATSGKEIIVQRQGSRESLDGRSVLLSA 341
              E LG  +YLY     G  +IVQ +     L G++V +++
Sbjct: 296 GFTEFLGGTTYLYGHIEPGMPLIVQGEAGPAPLVGQTVFVTS 337