Pairwise Alignments

Query, 292 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 312 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  135 bits (339), Expect = 2e-36
 Identities = 84/277 (30%), Positives = 143/277 (51%), Gaps = 4/277 (1%)

Query: 16  VTPFIVVFATFFLYPLIEMVRISFTDAPLIGEGNWVGFANYTKLLSDRLFVTSLKNNGYF 75
           V P +VV +   ++P +  + +S     L  E +++GF NY +L SD  F  SL +   +
Sbjct: 32  VIPALVVISAVIVFPWVFTLWMSVHRWTLGQEQSFIGFDNYIRLASDLRFWESLWHTLIY 91

Query: 76  VLLTVVPTTVIALTIALAVSRLSGVKQTIAMSLFFLPYVLPVSVVTEIWAWMLDLQFGIL 135
            +L+VV    +  T+A  V       +     +F +P +     +  +W  M   Q G+L
Sbjct: 92  TVLSVVAPLFLG-TLAALVFDAQFPLRGFLRGVFVMPMMATPVAIALVWTMMFHPQLGVL 150

Query: 136 QPVISLIAGKPVAVFKNPYWVMPMVAVVTIWWTNGFNVLLFIAGLRNIPTELYEAASLDG 195
             ++SLI   P+    N   V+P + +V  W      +L+ + GL  +P E YE+A +DG
Sbjct: 151 NYLLSLIGIGPLEWIYNQSTVIPSLVLVETWQWTPLVMLIVLGGLAAVPREPYESAEIDG 210

Query: 196 ATTWQRFWRVTWPLLWPVTALVLTLQLILQLKIFDQIYLLSGGGPFNSSFVLLLKVYREA 255
           A  WQ+F  +T P++ P   + + ++ I  +K FD IY ++ GGP  +S  + + +Y  A
Sbjct: 211 ANAWQKFRYLTMPMIAPFLMIAVIIRSIDAVKSFDIIYAMTQGGPGTASETINIYLYNTA 270

Query: 256 FQLNNGGYASAVSTVLFLLIVIVSILQFQLLRIRRNS 292
           F   + GY SA++ V F++IV +S   F LL +R+ S
Sbjct: 271 FSYYDIGYGSAMAVVFFVIIVALS---FVLLMVRQRS 304