Pairwise Alignments

Query, 303 a.a., spermidine/putrescine ABC transporter permease from Agrobacterium fabrum C58

Subject, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

 Score =  120 bits (302), Expect = 3e-32
 Identities = 84/296 (28%), Positives = 157/296 (53%), Gaps = 23/296 (7%)

Query: 12  KKEKLSRSFALPQKLVS---YIQATPLFLILGFFLALPILMIAVVSFWDYDFA-QMYPDF 67
           K  KL R+F   Q+LV    ++     F+ L  F  LP  ++  +SF + D A   Y + 
Sbjct: 2   KLRKLKRAF---QRLVPEGRHLVIGVPFIWLFLFFMLPFFIVLKISFAEADVAIPPYTEI 58

Query: 68  VTF------------NYLETLGSWVIWQTYLNTLKYAAIVWAITLFCGFWVAYFLAFHIR 115
            T+            NY       +    YL +LK A     + L  GF +AY +A   +
Sbjct: 59  YTYVEDKIQLVLNLANYGLLTEDELYLSAYLGSLKMAFFSTLLCLLIGFPMAYAIANAKK 118

Query: 116 TTTMQMVLFLVCTVPFLTSNIIRMISWIPVLGRNGLVNSALVGTGILPEPVEWLLYSDFA 175
            T  Q VL L+  +P  T+ +IR+ +W+ +L  NGL+N  L+ TG++ +P++ +L ++ A
Sbjct: 119 ET--QTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLNGFLLWTGLIDQPLQ-ILNTNLA 175

Query: 176 VVLAMVHLYTLFMVTPIFNTLMRIDKSLIEAARDAGATGWQTLSNVIIPLAKPGMAIGSI 235
           V + +V+ Y  FM+ P+F  L++ D SL+EAA D G++ + +   + +PL+K G+  G +
Sbjct: 176 VYIGVVYSYLPFMILPLFANLVKHDPSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCM 235

Query: 236 FVVTLVMADFSTVQVMSGGQSASVA-LMMKNQMSLLQYPAAAANAVILLILVLLMV 290
            V   V+ +F   +++ G ++  +  ++ +   +   +P A+A AV++L ++++ +
Sbjct: 236 LVFIPVVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPI 291