Pairwise Alignments

Query, 334 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 319 a.a., Fructose ABC transporter, permease component FrcC from Variovorax sp. SCN45

 Score =  179 bits (455), Expect = 6e-50
 Identities = 111/295 (37%), Positives = 168/295 (56%), Gaps = 25/295 (8%)

Query: 35  VFFSVTTDTFLTAGNLLNVVRQAAPILIVSVAMTFVIITGGIDLSVGSMVALINAVGAIL 94
           +FF+  +D FLT GNL  +++Q   + ++++  T +I+T GIDLS G ++AL    G I+
Sbjct: 25  IFFATQSDRFLTGGNLSLILQQVMVVGVIAIGQTLIILTAGIDLSCGMVMAL----GGII 80

Query: 95  LAA-----GYPWPLVVVAMLVLGGGLGLVQGWFIAYQGIPAFIVTLAGLSILRGVALYIT 149
           ++      G P P+ ++  + +    GL+ G  +    +P FIVTL  L+I    A  IT
Sbjct: 81  MSKFATELGLPAPVAILCGIGVTTLFGLLNGLLVTRIKLPPFIVTLGTLNI----AFAIT 136

Query: 150 QGYSVP--IPDAPG-------FFYLGRGDFLGMPVPALIGVVVTVIAYIVLSSTRYGRRV 200
           Q YS    I D PG        F +G  +   +   A++ +V+  +A+ VL  T  GR +
Sbjct: 137 QLYSSSQTITDLPGGLTGLGTTFSIGNAE---VAWGAVLMLVLYGLAWFVLRETAAGRHI 193

Query: 201 VAVGSNPEAARRVGMPAKWILASVYLAAGVASAIAGLMIAARLGSGSSNAAVGFELQVVA 260
            AVG+N EA R VG+P + +L  VY+AAGV   IA L+  AR G G  NA     L  + 
Sbjct: 194 YAVGNNAEATRLVGIPTQRVLLGVYVAAGVLYGIASLLSVARTGVGDPNAGQTENLDAIT 253

Query: 261 AVVLGGTSLMGGRGTILGTVLGTMTIAVIGNGLILMHISPFFTQIVTGAIILAAI 315
           AVVLGGTSL GGRG +LG+++G + + V  NGL LM +S  +  +VTG +++ A+
Sbjct: 254 AVVLGGTSLFGGRGIVLGSLIGVLIVGVFRNGLTLMGVSSIYQVLVTGVLVILAV 308