Pairwise Alignments

Query, 334 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  183 bits (464), Expect = 6e-51
 Identities = 116/336 (34%), Positives = 177/336 (52%), Gaps = 20/336 (5%)

Query: 1   MTVYTERAKGSPLSDFFAENAQVLS-IAAFFALCMVFFSVTTDTFLTAGNLLNVVRQAAP 59
           M    E  KG  +SD   +  Q  + + + FAL  VF S T++ F T  N + +  Q   
Sbjct: 1   MANIAEPKKGFAVSDRQKDIIQKFAALGSLFALVAVF-SATSNAFFTVNNGMTIALQVTS 59

Query: 60  ILIVSVAMTFVIITGGIDLSVGSMVALINAVGAILLAA-GYPWPLVVVAMLVLGGGLGLV 118
           I ++ +  T VIITGGIDLSVGS++AL   V A+ +   G P P+ ++  ++ G   GL+
Sbjct: 60  IALLGIGATCVIITGGIDLSVGSVLALAGVVAALAVKELGMPVPIGMLLGILTGSLCGLI 119

Query: 119 QGWFIAYQGIPAFIVTLAGLSILRGVALYITQGYSVPIPDAPGFFYLGRGD--------- 169
            G  +    +P FI TL  + I RGVAL IT   +V       F  LG G          
Sbjct: 120 NGLLVTRFKLPPFIATLGMMLIARGVALQITGARAVS-GLGESFGELGNGALFRIVTIGD 178

Query: 170 -------FLGMPVPALIGVVVTVIAYIVLSSTRYGRRVVAVGSNPEAARRVGMPAKWILA 222
                  F G+P P ++ VV+ +    +L+ +  GR + AVGSN +AAR  G+    +  
Sbjct: 179 DGFPNVVFPGIPYPVILMVVIALAVSFMLNRSILGRHIYAVGSNADAARLSGVNVARVTN 238

Query: 223 SVYLAAGVASAIAGLMIAARLGSGSSNAAVGFELQVVAAVVLGGTSLMGGRGTILGTVLG 282
             Y+ +G  + + G ++ +RL +   N  V +EL  +A+ V+GGTSL+GG GTI GT +G
Sbjct: 239 FTYILSGTLAGLTGCVLMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIG 298

Query: 283 TMTIAVIGNGLILMHISPFFTQIVTGAIILAAIWLN 318
              I ++ NGL +  +S F  QI+ G +IL  +W++
Sbjct: 299 AFVIGILRNGLNMNGVSAFTQQIIIGLVILVTVWID 334