Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 334 a.a., sugar ABC transporter substrate-binding protein from Variovorax sp. OAS795

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 90/287 (31%), Positives = 128/287 (44%), Gaps = 22/287 (7%)

Query: 12  ALAATVLAGATLSAGLVQAAEKTIALVQINQQALFFNQMNEGAEKAAKEAGVKLV--IFN 69
           ALAA  LA    S+    A +  I LV   +   FF +M EGA++ AK+ G KL+     
Sbjct: 9   ALAAMSLAA---SSAAFAADQPVIGLVTKTETNPFFVKMKEGAQEEAKKLGAKLLSGAGK 65

Query: 70  ANNDPAAQNSAIETYIQQKVDGIAVVAIDVNGIMPAVKQAAAANIPVVAIDAIL-PEGPQ 128
           A+ D A Q +A+E  I      I +   D   I+PA+K+A    I V+A+D+   P    
Sbjct: 66  ADGDNAGQITAMENMIAAGAKTILITPSDAKAIVPAIKKARDKGIMVIALDSPADPPDAT 125

Query: 129 KAQIGVDNGKAGADMGKFFLDYVKSDMGGK-AKIGVVGAL-----NSFIQNIRQKGFEDT 182
            A    +N  AG  +G    +Y K+ M GK AKI  +  L      +   N   KGF   
Sbjct: 126 DALFATNNYTAGVLIG----EYAKAAMAGKPAKIVALDLLPGHPVGAQRHNGFMKGFGLA 181

Query: 183 IKDKTGITTAG------VVDGQNVQDTALSAAENLITGNPDMTAIYATGEPALLGAVAAV 236
             D      +       + D    Q  A +A EN +   PD+  +Y   EPA  GA  A+
Sbjct: 182 ANDAKSNELSKSPEIVCMADSFGDQAKAQTAMENCLQKAPDVNLVYTINEPAAAGAYNAL 241

Query: 237 ESQSKQKDIKVFGWDLTKQAITGIDAGYVAGVIQQDPAEMGAAAVKA 283
           +   K+K + +   D   Q I   +AG +A   QQ P +M A  V A
Sbjct: 242 KRAGKEKGVLIVSVDGGCQGIKDTNAGVIAATSQQYPLKMAAMGVAA 288