Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 327 a.a., ABC transporter periplasmic-binding protein YphF from Escherichia coli ECRC101

 Score =  114 bits (285), Expect = 3e-30
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 25/321 (7%)

Query: 1   MPNFKRRYFSAALAATVLAGATLSAGLVQAAEK--TIALVQINQQALFFNQMNEGAEKAA 58
           MP   R   +  L AT+L  A  +    +AA+K  TI  + ++ Q  ++  + +G + AA
Sbjct: 1   MPKKMRTTRNLLLMATLLGSALFA----RAADKEMTIGAIYLDTQG-YYAGVRQGVQDAA 55

Query: 59  KEAGVK--LVIFNANNDPAAQNSAIETYIQQKVDGIAVVAIDVNGIMPAVKQAAAANIPV 116
           K++ V+  L+  NA  D + +++ ++T + + VD I + A+  NG    V++A+ A IPV
Sbjct: 56  KDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPV 115

Query: 117 VAIDAILPE-GPQK---AQIGVDNGKAGADMGKFFLDYVKSDMGGKAKIGVVGALNSFIQ 172
           +  +  + + G  K   A +  D  + G  +G    DY  ++   + KI V+      + 
Sbjct: 116 ICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVC 175

Query: 173 NIRQKGFEDTIKDKTGITTAGVVDGQN--VQDTALSAAENLITGNPDMTAIYATGEPALL 230
             R+KGFE+ +K +  +  A +V  Q   V D A+S  E LI   PD+ AI      A L
Sbjct: 176 VQRRKGFEEVLKSR--VPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATL 233

Query: 231 GAVAAVESQSKQKDIKVFGWDLTKQAITGIDAGYV-AGVIQQDPAEMG----AAAVKALK 285
           GAV AV +Q++   I VFG D+T +    ++   V   V+     +MG    A  +K + 
Sbjct: 234 GAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVIN 293

Query: 286 TVADGGTVEKTIAVPVTIVTK 306
             ADG   EK I VP+ + TK
Sbjct: 294 KQADG---EKVIQVPIDLYTK 311