Pairwise Alignments

Query, 654 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 626 a.a., putative ABC efflux transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  289 bits (740), Expect = 2e-82
 Identities = 178/574 (31%), Positives = 288/574 (50%), Gaps = 18/574 (3%)

Query: 61  RFWISARGFWS-RRGDALAWPFTLGLLVMIGINVGFQYGINIWNRGIFDAIEKRDASTVY 119
           +FW  A  ++S RR       F L LLV+   +V      + W  G + A++  D +  +
Sbjct: 67  QFWQLAGPYFSFRRSWRPLLVFAL-LLVLTLFSVRLNVLFSFWYNGFYSALQGLDQAAFW 125

Query: 120 FLASIFPPLVLGSVFIVTSQVYVRMRIQRRWRSWLTKALVGRWIANGRYYQLNLIDGDHQ 179
           +L  +F  L    V       YV      +WR WLT+ L   W+    YY+   +     
Sbjct: 126 YLLGVFAVLATIHVLRSLFTFYVSQAFSIKWRVWLTERLTHDWMQGDAYYRGQFLAEPVD 185

Query: 180 NPEARLSEDMRIATEAPVDFVSGVIAAFVSASTFIVVLWTIGGALTVSIGGAGVTIPGFL 239
           NP+ R+  D+       V    G ++A VS   F  +LW +   LTV    AGV IP  +
Sbjct: 186 NPDQRIELDVNAFVTNSVSLALGAVSALVSLVAFTGILWGLSAPLTV----AGVEIPRAM 241

Query: 240 VIAAVIYAAITSTSIAF-IARNFVKVSEVKNQVEAEFRYTLTRVRENGESIALLGGEEEE 298
           V A  +Y  I +T +AF + R  ++++ +  ++ A FRY L R+REN E+IA   G + E
Sbjct: 242 VFAVYLYVII-ATWVAFRLGRPLIRLNFLNEKLTANFRYALMRLRENAENIAFYQGAQVE 300

Query: 299 RSDLDKRFGNVRRQWRLMAQQYMRTTVVSNGSMLIAPVVPLLLCAPKFLDGSMSLGQVMQ 358
           R  L  RF  +      +  + ++ +  + G   +A V P +L AP+F  G++ LG VMQ
Sbjct: 301 RGTLLGRFAALIVNVWALVYRNLKFSGFNLGVSQVAVVFPFILQAPRFFSGAIKLGDVMQ 360

Query: 359 AASAFTIVQSAFGWLVDNYPRLADWNACARRVASLMMSLDGLERAEKSDTVGRIVRGETE 418
            + AF  VQ +  +  ++Y   A + A   R+   +         + +     + R  TE
Sbjct: 361 TSQAFGQVQDSLSFFRESYDAFAQYRATLDRLTGFL---------DANQQASALPRVTTE 411

Query: 419 GET-ILSLKDVSVSLGDGTAVVKETDVEIGAGERVLVAGESGSGKSTLVRAISGLWPWGG 477
            +   L +  + V   DG A++ + D+ + AG+ +L+ G SGSGK+TL+RA++GLWP+  
Sbjct: 412 DQAHALQITGLQVLRPDGHALIADLDLSLHAGQALLIKGPSGSGKTTLLRALAGLWPYAE 471

Query: 478 GSVNFRADSRLFMLPQRPYIPAGTLRRAVCYPQPAESWTSEEIGAALDKVGLGQLKEKIE 537
           G V      +   L QRPY+P G LR  + YP  +       +  AL +V L  L E+++
Sbjct: 472 GKVRRPTGHQALFLSQRPYLPLGDLRTVIAYPAASNPKDELLMQQALRQVNLAHLAERLD 531

Query: 538 DEAPWDQTLSGGEKQRLTFARLLLNAPDIIVMDEATAALDEKSQDKMMQTVIEELPDATI 597
               W   LS GE+QRL FAR+L N P ++ +DE+T+A+DE  +  +   +  E+P A +
Sbjct: 532 VSCDWSHILSVGEQQRLAFARVLFNRPQVVFLDESTSAMDEGLEHALYALLRSEMPSALL 591

Query: 598 ISVAHRAELEAFHSRKITLERRDGGAKLVSDIEL 631
           +SV HR+ L AFH+ ++ ++   G + L  +  L
Sbjct: 592 VSVGHRSTLAAFHTHRLEVDGHGGWSLLEQEAVL 625