Pairwise Alignments

Query, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 544 a.a., putative ABC transporter ATP-binding protein YejF from Xanthobacter sp. DMC5

 Score =  459 bits (1180), Expect = e-133
 Identities = 254/529 (48%), Positives = 353/529 (66%), Gaps = 9/529 (1%)

Query: 11  VLSVRNLTVDLPRG--MERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLS-P 67
           +LSVR+L+V   RG     + AVK +SF+L  GE L ++GESGSGKSVTA +++ LL  P
Sbjct: 5   LLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKLLPYP 64

Query: 68  VITVSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAH 127
             +  SGEI FKG D+L   E ++R +RG  ++++FQ+P+S+LNPL T+  QV E+L  H
Sbjct: 65  SASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEMLILH 124

Query: 128 GVGTRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADE 187
              +     A+ LELL EVG+P P      YP +LSGGQRQRVMIAMALA +PD+LIADE
Sbjct: 125 RGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLLIADE 184

Query: 188 PTTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRAD 247
           PTTALDVT QAQIL+L++++Q R  M+++FITHD G+V +IADRV VM+KG +VEQG A+
Sbjct: 185 PTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQGGAE 244

Query: 248 QVLINPVHPYTQRLVAAVPRMRSVERSIDEEVPVVLEVENLEKEYRSSGSFFRK-ARTVK 306
           +   +P HPYTQ L+ A P+       I  + P+V+E  +L+  +       RK    VK
Sbjct: 245 ETFQHPRHPYTQALLKAEPKPDPA--PIAPDAPLVMEANDLKVYFPIKRGILRKTVGHVK 302

Query: 307 AVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLDPDGGAIRFDGRDIATMDESAFRA 366
           AV+ VS  +R+G+TLGVVGESGSGK++LG  LL+L+    G I F G+ I  +   A R 
Sbjct: 303 AVDGVSIAIRRGETLGVVGESGSGKTTLGLALLRLIS-SAGPIAFLGKPIDALSFKAMRP 361

Query: 367 LRPYIQMIFQDPFASLNPRHTIGKILTVGPLAH--GMALHEARTKALGILKLVGLDEQAY 424
           LR  +Q++FQDPF +L+PR ++ +I+  G L H   ++  E   + +  L  VGLD +  
Sbjct: 362 LRSDLQIVFQDPFGALSPRMSVAEIVGEGLLVHQRQLSADERDARVVAALADVGLDPETR 421

Query: 425 DRFPHEFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQREMKVAM 484
            R+PHEFSGGQRQRI IARA+  +P  +V DE  SALD+ +QAQ+++LL  +Q++  +  
Sbjct: 422 HRYPHEFSGGQRQRISIARAMALEPSFVVLDEPTSALDMIVQAQIVDLLRALQKKRDLTF 481

Query: 485 IFITHDLRVASQICDDVLVMHKGTVVEQGPPTKIFRAPTHPYTQKLVAA 533
           +FI+HDLRV S +   +LVM  G +VE+GP   +F  P   YT+ L AA
Sbjct: 482 MFISHDLRVVSALASRILVMRNGKMVEEGPAHDVFEHPKEDYTRALFAA 530



 Score =  203 bits (517), Expect = 1e-56
 Identities = 122/271 (45%), Positives = 164/271 (60%), Gaps = 13/271 (4%)

Query: 282 VLEVENLEKEYRSSGSFFRKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKL 341
           +L V +L   +R        A    AV  VSF+L KG+TL +VGESGSGKS     +LKL
Sbjct: 5   LLSVRDLSVAFRRGDG----APPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKL 60

Query: 342 L-----DPDGGAIRFDGRDIATMDESAFRALRPY-IQMIFQDPFASLNPRHTIGKILTVG 395
           L         G I F GRD+ T+ E   R +R   I M+FQ+P +SLNP HTI + +   
Sbjct: 61  LPYPSASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEM 120

Query: 396 PLAH-GMALHEARTKALGILKLVGLD--EQAYDRFPHEFSGGQRQRIGIARALMFDPVVL 452
            + H GM+ H AR + L +L  VG+   E+    +PH+ SGGQRQR+ IA AL  +P +L
Sbjct: 121 LILHRGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLL 180

Query: 453 VADEAVSALDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQ 512
           +ADE  +ALDV++QAQ+L+LL  +Q  + +AM+FITHDL +  +I D V VM KG +VEQ
Sbjct: 181 IADEPTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQ 240

Query: 513 GPPTKIFRAPTHPYTQKLVAAIPGADWEPSA 543
           G   + F+ P HPYTQ L+ A P  D  P A
Sbjct: 241 GGAEETFQHPRHPYTQALLKAEPKPDPAPIA 271