Pairwise Alignments

Query, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola ME23

 Score =  404 bits (1038), Expect = e-117
 Identities = 222/528 (42%), Positives = 332/528 (62%), Gaps = 6/528 (1%)

Query: 7   SADVVLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLL- 65
           SA  +L +R+L++    G ++   V  +S  + AGE L ++GESGSGKSVTA +++ LL 
Sbjct: 2   SAHPLLEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLLP 61

Query: 66  SPVITVSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLE 125
           SP +    G+I F G  +L A E+++R +RG  +++IFQ+P+ +LNPL T+  Q+AEVL 
Sbjct: 62  SPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLS 121

Query: 126 AHGVGTRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIA 185
            H    R+    +++  LE VG+         +P +LSGG+RQRVMIAMAL   PD+LIA
Sbjct: 122 LHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLIA 181

Query: 186 DEPTTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGR 245
           DEPTTALDVT QAQIL+L+ ++++  NM ++FITH+  +V  +ADRV VM+ G  VEQ R
Sbjct: 182 DEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNR 241

Query: 246 ADQVLINPVHPYTQRLVAAVPRMRSVERSIDEEVPVVLEVENLEKEYRSSGSFFRKARTV 305
             ++   P HPYT++L+ A P   +    ++     +L+V  L   +       R+    
Sbjct: 242 TRELFSAPQHPYTRQLLNAEPTGEA--PPLEPTASTLLDVRELGVSFPIRRGLLRRTVGE 299

Query: 306 KAV-NNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLDPDGGAIRFDGRDIATMDESAF 364
           K+V   +SF LR+G+++G+VGESGSGKS+ G  LL+LL    G I FDG+ +   +    
Sbjct: 300 KSVLQALSFSLRRGESIGLVGESGSGKSTTGLALLRLL-RSRGEIWFDGQPLHRFNHKQM 358

Query: 365 RALRPYIQMIFQDPFASLNPRHTIGKILTVG-PLAHGMALHEARTKALGILKLVGLDEQA 423
             +R  IQ++FQDP  SLNPR  + +I+  G  + H ++  E   + +  ++ VGLD  +
Sbjct: 359 LPVRRRIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHPLSPAEQTQRVIQSMQEVGLDPDS 418

Query: 424 YDRFPHEFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQREMKVA 483
             R+P EFSGGQRQRI IARAL+  P +L+ DE  S+LD ++QAQ+L LL  +Q+  ++A
Sbjct: 419 RHRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQTHQLA 478

Query: 484 MIFITHDLRVASQICDDVLVMHKGTVVEQGPPTKIFRAPTHPYTQKLV 531
            +FI+HDL V   +C  V+V+  G VVEQG   ++F  P   YT++L+
Sbjct: 479 YLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526



 Score =  179 bits (455), Expect = 2e-49
 Identities = 109/269 (40%), Positives = 158/269 (58%), Gaps = 15/269 (5%)

Query: 282 VLEVENLEKEYRSSGSFFRKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKL 341
           +LE+ +L   +R+ G      +  + V+ VS  +  G+TL +VGESGSGKS     +L+L
Sbjct: 6   LLEIRDLSIAFRNGG------QQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRL 59

Query: 342 LDPDG-----GAIRFDGRDIATMDESAFRALR-PYIQMIFQDPFASLNPRHTIGKILT-V 394
           L         G I F G  +    E   R +R   I MIFQ+P  SLNP HTI K L  V
Sbjct: 60  LPSPPVVYLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEV 119

Query: 395 GPLAHGMALHEARTKALGILKLVGLDEQA--YDRFPHEFSGGQRQRIGIARALMFDPVVL 452
             L  GM    AR + +G L+ VG+ + A     FPH+ SGG+RQR+ IA AL+  P +L
Sbjct: 120 LSLHRGMRRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLL 179

Query: 453 VADEAVSALDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVEQ 512
           +ADE  +ALDV++QAQ+L+LL  +++E+ + ++FITH+L +  ++ D V VM  G  VEQ
Sbjct: 180 IADEPTTALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQ 239

Query: 513 GPPTKIFRAPTHPYTQKLVAAIPGADWEP 541
               ++F AP HPYT++L+ A P  +  P
Sbjct: 240 NRTRELFSAPQHPYTRQLLNAEPTGEAPP 268