Pairwise Alignments

Query, 443 a.a., AgaE protein from Agrobacterium fabrum C58

Subject, 375 a.a., opine oxidase subunit B from Pseudomonas putida KT2440

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 19/244 (7%)

Query: 18  EVDVVVIGGGIVGTSTALELIDQGLRVALCEKGGIGHEQSSRNWGWVRI---SRRDPREV 74
           + DV++IGGG+VG +    L     R+ + +     +  +  N+G V       RDP   
Sbjct: 4   QFDVIIIGGGMVGAAIGYGLAGGKRRILMLDGADTDYRAAKANFGLVWAHGKGMRDPNYQ 63

Query: 75  PLMAEALRIW----ADLNRRTGRETGFKQSGIVFTCANDKEFSEHER----WNRNLEGYQ 126
            L   A + W    + L   +G    ++Q G +  C +D EF    +    WNR      
Sbjct: 64  RLSLNAAKAWPSFASQLEEESGISLDYEQKGGLNFCLSDDEFDARAKAMDAWNRQTPELA 123

Query: 127 IESRMLSAAEFKAKYPGSDMN--VAGALYTAGDCRAEPQRAAPAIAEAARDRGAFILTEC 184
             + ML  AE   ++P   +   V GA +   D  A P R   A+ +A   RG  +    
Sbjct: 124 PSAHMLDRAELLRRFPTMKIGKAVVGASFGEFDGHANPLRLLAAMQKAFMARGGQLQNNR 183

Query: 185 AVRGL-QLSGGKVSGVVTERGE--IACKAAVMAGGAWSSLFLGNNGLDLPQLKVMNSVLR 241
            V  + +LSGG   G   + GE    C+  V+A G   +      GL++P       +L 
Sbjct: 184 PVTDIRRLSGG---GFEVQSGEYRAQCERIVIAAGLGCAALGPMVGLNVPIRPQRGQLLV 240

Query: 242 TKPL 245
           T+ L
Sbjct: 241 TERL 244



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 343 TDGALAKLKQAF---PVFEKAEIAQRWAGMIDVTPDAIPVIDAIDAIPGFHVATGFSG 397
           T+GA    ++A    P   +A++ ++W+ +  +TPD  PV       PG  +AT  SG
Sbjct: 280 TEGAARITRKALKILPDLAQAKLVRQWSCLRIMTPDGNPVYARSLTHPGAEIATCHSG 337