Pairwise Alignments

Query, 553 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 537 a.a., Periplasmic dipeptide transport protein from Xanthobacter sp. DMC5

 Score =  164 bits (416), Expect = 6e-45
 Identities = 145/529 (27%), Positives = 243/529 (45%), Gaps = 38/529 (7%)

Query: 20  LALGASGVVLSGLPGFSRAMAQGESAKGQLTVGFSQEPTVFNPHMPHIEVDEGIHFSIFD 79
           L  GA   +L  LP  +R      +  G L      EP      +        +  +IFD
Sbjct: 15  LLAGAGASLL--LPAAARRAGAAPATGGTLVAVLDPEPAGLVAGLTISAPAVAVSANIFD 72

Query: 80  PLFYVDEKGAFVAALAAEVPTVENGGISADGLAWKVKLRDDVKWHDGKPFTAEDVKFTLE 139
            L   DE      +LA    T      SADG     +LR+DV WHDG PFT+ DV ++L 
Sbjct: 73  GLVEYDEGFKLKPSLATSWET------SADGTVITFRLRNDVTWHDGTPFTSADVAYSLL 126

Query: 140 LLVDPNFRSWRKTGHEFVRDLTVVSPTEITWKMEKPFAPYPSILAS-----TFITPKHLL 194
            +     +     G+    +LT V   +    + +   P P + A+     T I PKHL 
Sbjct: 127 EVT----KKVHPRGNAVFANLTAVDTPDPYTAVLRFSRPSPVVWAAFNGTETQILPKHLY 182

Query: 195 GAEADRNTAAYNNAPVGTGAFKWKERVAGDYILLEANADYFGDG-PHIERLIYKYVPDLN 253
               +  T   N  P+GTGAF +KE V G+ I+LE N +Y+  G P+++R++++ + D  
Sbjct: 183 EG-TNPLTNPLNGKPIGTGAFVFKEWVKGERIVLERNPNYWDKGRPYLDRVVFRIIRDPA 241

Query: 254 VLYTQFKTGDIDVVGLQWITPD---HYDEAKDLSGKVVNVVPGSTIESLSFNMERPQFKD 310
                 +TG+   + L  +          +KDL  +       + +    FN+ R  F D
Sbjct: 242 SRAAALETGEAQYIPLNPVPLSDVARIKASKDLVVETRGFEGPAPMYFFDFNLRREPFGD 301

Query: 311 PAVREALYAAIDKQSIIEALYYGLPAPTESYVPQ-QSFYYNPDLPKHEYSIERAKKLLED 369
             VR+A   A++++++ E ++YGL  P    VP  Q+ ++  DLP+++Y+I +A+ LL+ 
Sbjct: 302 IRVRQAFAHALNRKALAETVFYGLAKPAAGPVPSYQTQFFATDLPQYDYNIAKAEALLDA 361

Query: 370 AGWVAGADGVRAK-DGVKLAFTCSTTAGNHIREQVQQYIQQSFKDIGVEMTISN--LPPA 426
           AG   GADGVR + D +  A+      G   R +  +Y +Q+ K IGV++T+ N  LP  
Sbjct: 362 AGLKKGADGVRLRIDHIPSAY------GEDYR-RAGEYFKQALKRIGVDVTLRNYDLPTY 414

Query: 427 VMWGDYWMLSKFDSVIVGLDFLTGPDPDTSDFFRSTSSPAKGGS-GQNTWQFANKEVDEL 485
           +      + +++D       +   PDP      R  S   K G+   N    A+ E+D +
Sbjct: 415 IK----VVFTEYDFDTHSAWYSAYPDPQIGVQRRYWSQAIKKGTPSSNASGIADPEIDAV 470

Query: 486 LAKGGSLFVPEERKAVYLKIQEIMRKELPLLPLFQYATVRGHKQGVENV 534
           + +  +    E+R A   ++Q + + +LP + L +    R +   +  +
Sbjct: 471 IERIQTEGNVEKRNADIRELQRLAQVKLPSVNLLELTFYRAYSAKLSGI 519