Pairwise Alignments

Query, 553 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 535 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  182 bits (463), Expect = 2e-50
 Identities = 162/530 (30%), Positives = 250/530 (47%), Gaps = 51/530 (9%)

Query: 8   LMNTTRRQALGLLALGASGVVLSGLPGFSRAMAQGESAKGQLTVGFSQEP--------TV 59
           + N T R+   LLA  A GVV   LPG     A+  S  G  T+  S EP        T 
Sbjct: 3   IFNQTTRRGF-LLASVALGVV--SLPGLKLNAAEPASG-GTATLLISSEPPVLTTIAHTA 58

Query: 60  FNPHMPHIEVDEGIHFSIFDPLFYVDEKGAFVAALAAEVPTVENGGISADGLAWKVKLRD 119
           +N      +V EG+    FD              L  +    ++  +SADGL +   LR 
Sbjct: 59  YNSVYISPKVTEGLLTYDFD--------------LNPKPLLAKSWDVSADGLRYTFNLRP 104

Query: 120 DVKWHDGKPFTAEDVKFTLELLVDPNFRSWRKTGHEFVRDLTVVSPTEIT--WKMEKPFA 177
            VKWHDGKPFT+ DV F++  + + + R  R T   F+    V +P E+T    + KP A
Sbjct: 105 GVKWHDGKPFTSADVAFSISTIKEVHPRG-RNT---FLNLTAVETPNELTAVLVLSKP-A 159

Query: 178 PY---PSILASTFITPKHLL-GAEADRNTAAYNNAPVGTGAFKWKERVAGDYILLEANAD 233
           PY       A T I PKHL  G +   N    N AP+GTG FK+KE V G +I+ E NAD
Sbjct: 160 PYLITALAAAETPIVPKHLYEGTKVTENPV--NLAPIGTGPFKFKEWVRGSHIVFERNAD 217

Query: 234 YF-GDGPHIERLIYKYVPDLNVLYTQFKTGDIDVVGLQWITPDHYDEAKDLSG---KVVN 289
           Y+    P+++RLI +++PD +      +TG+ID+     +     D  K+L         
Sbjct: 218 YWDAPRPYLDRLIVRFIPDASARAIAIETGEIDLAPSTPVAYSDLDRLKELPSLGFDTNG 277

Query: 290 VVPGSTIESLSFNMERPQFKDPAVREALYAAIDKQSIIEALYYGLPAPTESYV-PQQSFY 348
               ++I  + FN+E+  FKD  VR A    ID+  I   + +G  A     + P+ + +
Sbjct: 278 YQYTNSISRVEFNLEKDVFKDVRVRRAFAHVIDRNVIFNTVNFGYGATIAGPINPKLTKW 337

Query: 349 YNPDLPKHEYSIERAKKLLEDAGWVAGADGVRAKDGVKLAFTCSTTAGNHIREQVQQYIQ 408
           +  DL  +   ++ A+ LL++AG+  GADG+R K  + L +  ST A      +   YI+
Sbjct: 338 FVNDLKTYPIDLKAAEALLDEAGYKRGADGIRFK--LNLDYVPSTEA----YPRGADYIR 391

Query: 409 QSFKDIGVEMTISNLPPAVMWGDYWMLSKFDSVIVGLDFLTGPDPDTSDFFRSTSSPAKG 468
           Q+   +GV++T+     A      +    FD    G+  L  P       + S +   KG
Sbjct: 392 QALAKVGVDVTVRTQDFATYTKRIYTDRDFDFAYEGMSNLFDPTVGVQRLYWSKNF-KKG 450

Query: 469 GSGQNTWQFANKEVDELLAKGGSLFVPEERKAVYLKIQEIMRKELPLLPL 518
               N   ++N +VD LL        P++R A + +IQ+I+ +++P + +
Sbjct: 451 VPFSNGAAYSNPKVDALLEAAAIEIDPDKRVAQWKEIQQILVEDVPAIDI 500