Pairwise Alignments

Query, 316 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 329 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  215 bits (547), Expect = 1e-60
 Identities = 117/309 (37%), Positives = 192/309 (62%), Gaps = 6/309 (1%)

Query: 11  QSLVLLLLVSIIGFAILNLAPGGPLSQFALTPGM-TREALDRIAHQMGLDRPLPIQYLDW 69
           Q++  +L + I+ F +L LAPG      A   G  T E +  +  + GLD P+  Q +++
Sbjct: 17  QAVPTVLGIVILNFFLLQLAPGDAADVLAAEAGSATVETMAEMRSRFGLDLPIVHQLMNY 76

Query: 70  AWRLLQGDWGKSYRDQRPVLDIISGHLFATLLLMVSSTVVSVLVGTWIGIKGAIKRYTLF 129
              L Q   G S R   PV D+I   L  TL LM ++  +++ VG ++G   A+    L 
Sbjct: 77  LGNLAQFSLGFSPRYGMPVADLIGQRLPGTLALMGAALGIAIFVGVFLGSIMALFSGKLP 136

Query: 130 DYTATVGAMIALSIPTFWFGLVAIYVFALRLKWLPAGNMYTIGDQ-----SLYDYAIHLI 184
           D   ++G++I  S+P FW GL+ I  F+++L WLP+G   TIG       +  D   +++
Sbjct: 137 DRIISIGSLIFYSVPGFWIGLMLILTFSVKLGWLPSGGDSTIGSSLTGFAAFLDRLRYIV 196

Query: 185 MPSLVLALVNIAVWSRYMRTATLDVINQDFVRTARAKGLTPRRVLMKHVVGNALLPMITL 244
           +P+L LAL  +A+++R  R A L+V +QD+VRTARAKG++P R++ +H++ NAL+P+ T+
Sbjct: 197 LPALSLALYFLAIYARLTRAAMLEVKSQDYVRTARAKGVSPFRLITRHILRNALIPITTM 256

Query: 245 AGLQLPTILGGALVTETVFTWPGMGRLFLDSLGYHDYPVVMGLLMFSAILVLFGSLLADL 304
           AG+ +  +LGGA+V ETVF+WPG+GRL  +++   D+ V++G+L+ S+++V+  +   DL
Sbjct: 257 AGMHIGGLLGGAVVVETVFSWPGLGRLAFEAVMARDFSVLLGILLLSSLVVIIVNAAVDL 316

Query: 305 LVALVDPRI 313
           L A +DPRI
Sbjct: 317 LQAWLDPRI 325