Pairwise Alignments

Query, 296 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

 Score =  199 bits (506), Expect = 6e-56
 Identities = 106/286 (37%), Positives = 169/286 (59%), Gaps = 10/286 (3%)

Query: 12  APRFHWWQNRTLRRFARHKLAVLGVIMIMIMIFACVVGPYLLPYD--ELFIDLRARFAPP 69
           +P   +WQ      F+++K AV G++ +++++F  +  P++ P++  E + D        
Sbjct: 18  SPYKEFWQ-----AFSKNKGAVAGLLFMLLIVFCAIFAPWVAPHNPSEQYRDFLLTPPAW 72

Query: 70  LTG---YHIFGTDPLGRDIAARLFNAGRISLLVGFFAMVLSTLIGTVIGVVAGYYGGRIG 126
           L G     + GTD LGRD+ +RL    R+SLL+G  ++V+S + G ++G+ AG++   +G
Sbjct: 73  LEGGQMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLG 132

Query: 127 AILMRFVDAFLSFPSIFLLLALAAFVKPSPFMITLIIAVTSWMEIARLVEAEVRSLRERD 186
             +MR +D  L+ PS+ L +A+ A + P      + IA+ S     RL  A V     RD
Sbjct: 133 PTIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRD 192

Query: 187 FVMAARMLGLPNGWIMFRELLPNAIGPIIVAATLTVARAILLEAYISFLGYGIQPPLPSW 246
           +V AAR+ G     +MF  +LPN + P+IV ATL+ + AIL  A + FLG G+QPP P W
Sbjct: 193 YVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEW 252

Query: 247 GNMLNGAQQYLDKAPWLAIIPGVAITLAVTSFNFIGDGLRDALDAR 292
           G ML  A+ Y+++A W+  +PG+ I L+V + N +GDGLRDALD +
Sbjct: 253 GTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPK 298