Pairwise Alignments

Query, 296 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  205 bits (522), Expect = 9e-58
 Identities = 111/288 (38%), Positives = 171/288 (59%), Gaps = 14/288 (4%)

Query: 12  APRFHWWQNRTLRRFARHKLAVLGVIMIMIMIFACVVGPYLLPYD--ELFIDLRARFAPP 69
           +P   +WQ      FAR+K AV+G+  + +++F  +  P++ P+D  E + D      PP
Sbjct: 23  SPYKEFWQ-----AFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFL--LTPP 75

Query: 70  L-----TGYHIFGTDPLGRDIAARLFNAGRISLLVGFFAMVLSTLIGTVIGVVAGYYGGR 124
           +     T   I GTD LGRD+ +RL    R+SLL+G  ++V+S + G ++G++AG++   
Sbjct: 76  VWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQL 135

Query: 125 IGAILMRFVDAFLSFPSIFLLLALAAFVKPSPFMITLIIAVTSWMEIARLVEAEVRSLRE 184
           +G  +MR +D  L+ PS+ L +A+ A + P      + IA+ S     RL  A V     
Sbjct: 136 LGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELN 195

Query: 185 RDFVMAARMLGLPNGWIMFRELLPNAIGPIIVAATLTVARAILLEAYISFLGYGIQPPLP 244
           RD+V AAR+ G     +MF  +LPN + P+IV ATL+ + AIL  A + FLG G+QPP P
Sbjct: 196 RDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTP 255

Query: 245 SWGNMLNGAQQYLDKAPWLAIIPGVAITLAVTSFNFIGDGLRDALDAR 292
            WG ML  A+ Y+++A W+  +PG+ I L+V + N +GDGLRDALD +
Sbjct: 256 EWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPK 303