Pairwise Alignments

Query, 537 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  102 bits (254), Expect = 4e-26
 Identities = 146/548 (26%), Positives = 224/548 (40%), Gaps = 62/548 (11%)

Query: 7   MKMPGLSSRLAMLALGTAMAL---PLVPSAAFAEDKVSVAVNTMQIFSSLDPAKVTDYTG 63
           MK   L   L  L LG A  L   PLV     + +   +   T  +      A  +  T 
Sbjct: 14  MKSRPLRLALVALLLGGATQLAAKPLVVCTEASPEGFDIVQYTTAV-----TADASAETV 68

Query: 64  YMAIVNMYDGLTTVNAKGEIVPHLAKSWDVSQDGLTYTFHLRDDAKFQDGTAVK------ 117
           +  +V+   G T      EI P LA+ WD+S DGLTYTFHLR   KF      K      
Sbjct: 69  FNRLVDFKPGTT------EIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLN 122

Query: 118 AADLAWSIQRLLGINKGPSNLIVGVLKP-----------ENVTAPDEATLVMKIERQFSP 166
           A D+ WS+ R L  N  P +    V  P           ++V+  DE T+V+ + R  +P
Sbjct: 123 ADDVLWSLNRQLDPNH-PWHDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAP 181

Query: 167 FMAATPLMMAMNKTLIEANAKPED--KWGE-AYVGEHSAGSGPYKLVSYNRSADMVIARN 223
           F+      MAM  T I +    +   K G+ A +     G+GP+    YN+ A +    N
Sbjct: 182 FLRD----MAMGFTSIYSAEYGDQLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPN 237

Query: 224 ADYFLGWSKGKPIDEVRFVQTSDDATV---KALAEKGELGLSSHGLGNDTYESIGRMKGY 280
            DYF    +GKP  +      + D+ V   K  A + ++ L       D   SI +    
Sbjct: 238 PDYF----RGKPPADALVFAIAIDSNVRLQKLRANECQVALYPK---PDDVPSIKQDPKL 290

Query: 281 KLIQTRTAGGFVIKLNTKVYPTDDVHVRRAIAYATDYKT-IQEVIYPGFDMRG----PLS 335
           K+ +        I +NT+    +DV VR+AI  A D +T + ++   G  + G    P +
Sbjct: 291 KVEEIEALVTGYIAMNTQHKYLNDVRVRKAINMAFDRQTHVDQLFGKGNALVGVNPYPPT 350

Query: 336 DAFKDAHNGDIQPGVYDLEKAKEELAKSKY-AGQKITLV--NSYVASLAFEAEVALLLQS 392
               + HN   Q    DL+KA+  L+++    G  ITL   N    +       A +LQ+
Sbjct: 351 MIGYNTHN---QNPPRDLDKARALLSQAGVPEGTVITLFTRNGGGPTNPNPRLSAEMLQA 407

Query: 393 SLEQVGITLDIKPEPWNRIVELSSKPETTPASTQVNISPTYPSPDSMFYNQYHSKASGTW 452
            L+Q+G+ LDI+   W  ++  +   E    ST    +     PD+         A  + 
Sbjct: 408 DLKQIGLKLDIRVMEWAEMLRRAKNGEADLVST--GWAGDNGDPDNFLSPLLSCDAVKSG 465

Query: 453 MSMEWLQNAEIDGLIDKVRATTNVNEQNATYKELQTKIADLQPDVWAVAPNRRYAANKCL 512
            +     N +   LI + R   + +E+   Y E      D QP +    P    A    +
Sbjct: 466 ENYARWCNPKFQELISRAREVIDNDERARLYNEALKVYDDEQPWISMAHPKMFTAMRDNV 525

Query: 513 QGYEFIPM 520
           +GY   P+
Sbjct: 526 EGYVINPL 533