Pairwise Alignments

Query, 342 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  179 bits (454), Expect = 9e-50
 Identities = 116/333 (34%), Positives = 177/333 (53%), Gaps = 16/333 (4%)

Query: 6   LVAILNRLGAFVLVMIALSIMIFALARVVPGDPARMALGPAATQEQVDALRGEMGLDKPL 65
           LV I+ RLG  VLVM++++++ F + R+  GDP  + +G   +QE   ALR  +GL+  L
Sbjct: 2   LVFIIKRLGNAVLVMLSVALIAFLIFRLA-GDPVELMVGEQTSQEDRAALRERLGLNDSL 60

Query: 66  AVQYLDYIGNALHGDLGFSLVSQRPVTTDLAQTVPATVELVLVSVIFMFAVAIPLGVITA 125
             QYL ++ +A  G+ G S  + + V   +A+  PAT+ELVLV+ +    V +PLGV+TA
Sbjct: 61  PTQYLRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLGVLTA 120

Query: 126 HYRDRPLDHIGRILSLTGVTIPSFLFAITLQLLAARFLSGWPIIGRLD-HGLGWQGGPTG 184
             R +      + LS+ GV++PSF+  I L L+ +  L   P  GR D   LGW    TG
Sbjct: 121 IRRGKWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQLGWWS--TG 178

Query: 185 FILIDGTLAGRFDVVLDALKHLALPAFALSMAGIGQITRITRSSMIENQRKDHVLTLQSF 244
            +   G  A            L LPA ALS+  I  + R+ R+ M+E  R D V   ++ 
Sbjct: 179 LLTSSGRAA------------LILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARAR 226

Query: 245 GVPERVIIFRYLLKLSSIAPLTIMGLEFASLIGNAFVIEMVFAWGGFASYGLNAILQKDL 304
           G+P   I FR+ L+   +  +T+  +   SLI  A + E VF W G     + A+   D+
Sbjct: 227 GIPRWRIYFRHALRNCLMPVVTLTTMNVGSLIAFALITETVFQWPGMGMLFIQAVTFLDI 286

Query: 305 NAVTAVVLVAGLFFIVANLIVDVLISIIDPRLR 337
             + A + +    F+V N  VD+  ++IDPRLR
Sbjct: 287 PVMAAYLCIISFIFVVLNTFVDIAYAVIDPRLR 319