Pairwise Alignments

Query, 421 a.a., transcription termination factor Rho from Agrobacterium fabrum C58

Subject, 452 a.a., ATP synthase from Pseudomonas simiae WCS417

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 24/280 (8%)

Query: 144 PNERFKMELEVPTSKDLSSRVIDLVAPLGKGQRGLIVAPPRTGKTVLLQNIAHSITANHP 203
           P ER ++   + T      R ID +  LG+GQR  + A    GKT LL  IA ++     
Sbjct: 145 PTERPRINRALATGV----RSIDGLLTLGEGQRVGLFAGAGCGKTTLLAEIARNV----- 195

Query: 204 ECYLIVL-LIDERPEEVT-------DMQRSVKGEVVSSTFDEPAVRHVQVAEMVIEKAKR 255
           +C +IV  LI ER  E+        D Q   K  +V +T D  ++   + A      A+ 
Sbjct: 196 DCDVIVFGLIGERGRELREFLDHELDEQLRSKAVLVCATSDRSSMERARAAFTATALAEG 255

Query: 256 LVEHGRDVVILLDSITRLGRAYNTVVPSSGKVL-TGGVDANALQRPKRFFGAARNIEEGG 314
               G  V++L+DS+TR  RA   +  ++G+ L  GG+  +      R    A  +   G
Sbjct: 256 YRRKGLRVLLLIDSLTRFARAQREIGLAAGEPLGRGGLPPSVYSLLPRLVERA-GLTRAG 314

Query: 315 SLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDILKSGTRKEDLL 374
            +T I T LI+  S M++ + +E +   +  IVL RK+A++  +PA+D+L S +R    +
Sbjct: 315 VITAIYTVLIEQDS-MNDPVADEVRSLLDGHIVLSRKLAERGHYPAVDVLASLSRILSNV 373

Query: 375 VPRQDLQKIFVLRRILAPMGTMDAIEFLIDKLKQTKTNSD 414
               D+Q    LRR+L+       IE ++ KL + +  SD
Sbjct: 374 AEPADIQAGTALRRLLS---AYQQIELML-KLGEYQPGSD 409