Pairwise Alignments

Query, 421 a.a., transcription termination factor Rho from Agrobacterium fabrum C58

Subject, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

 Score =  597 bits (1540), Expect = e-175
 Identities = 295/416 (70%), Positives = 362/416 (87%)

Query: 4   MKLQELKSKSPTDLLTFAESLEVENASTMRKQELMFAILKILASQDVEIIGEGVVEVLQD 63
           M L ELK K  TDLL  AE + +EN +  RKQ+++FA+LK  A    EI G+GV+E+LQD
Sbjct: 1   MNLTELKQKPITDLLEMAEQMGIENMARSRKQDVIFALLKKHAKSGEEISGDGVLEILQD 60

Query: 64  GFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVNTIN 123
           GFGFLRSA+A+YL GPDDIY+SPSQIRRF+L+TGDT+ G IR PKEGERYFALLKV+TIN
Sbjct: 61  GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN 120

Query: 124 FDDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSSRVIDLVAPLGKGQRGLIVAPP 183
           FD PE  ++K+ F+NLTPL+PN+R KME    +++DL+ RVIDL AP+GKGQRGLIVAPP
Sbjct: 121 FDRPENAKNKILFENLTPLFPNKRLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180

Query: 184 RTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHV 243
           + GKT++LQNIA +IT N+PEC+LIVLLIDERPEEVT+MQR+V+GEVV+STFDEP  RHV
Sbjct: 181 KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240

Query: 244 QVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF 303
           QVAEMVIEKAKRLVEH +DVVILLDSITRL RAYNTV+PSSGKVLTGGVDA+AL++PKRF
Sbjct: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300

Query: 304 FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDI 363
           FGAARNIEEGGSLTIIATAL++TGS+MDEVI+EEFKGTGN E+ LDR++A+KR+FPA++I
Sbjct: 301 FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI 360

Query: 364 LKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTMDAIEFLIDKLKQTKTNSDFFESM 419
            +SGTR+E+LL    +LQ++++LR++L PM  + AIEFL+DKLKQTKTN +FF SM
Sbjct: 361 NRSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLVDKLKQTKTNDEFFLSM 416