Pairwise Alignments

Query, 421 a.a., transcription termination factor Rho from Agrobacterium fabrum C58

Subject, 419 a.a., transcription termination factor Rho from Escherichia coli ECRC62

 Score =  595 bits (1534), Expect = e-175
 Identities = 292/416 (70%), Positives = 359/416 (86%)

Query: 4   MKLQELKSKSPTDLLTFAESLEVENASTMRKQELMFAILKILASQDVEIIGEGVVEVLQD 63
           M L ELK+   ++L+T  E++ +EN + MRKQ+++FAILK  A    +I G+GV+E+LQD
Sbjct: 1   MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD 60

Query: 64  GFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVNTIN 123
           GFGFLRSA+++YL GPDDIY+SPSQIRRF+L+TGDT+ G IR PKEGERYFALLKVN +N
Sbjct: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN 120

Query: 124 FDDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSSRVIDLVAPLGKGQRGLIVAPP 183
           FD PE  R+K+ F+NLTPL+ N R +ME    +++DL++RV+DL +P+G+GQRGLIVAPP
Sbjct: 121 FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP 180

Query: 184 RTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHV 243
           + GKT+LLQNIA SI  NHP+C L+VLLIDERPEEVT+MQR VKGEVV+STFDEPA RHV
Sbjct: 181 KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV 240

Query: 244 QVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF 303
           QVAEMVIEKAKRLVEH +DV+ILLDSITRL RAYNTVVP+SGKVLTGGVDANAL RPKRF
Sbjct: 241 QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF 300

Query: 304 FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDI 363
           FGAARN+EEGGSLTIIATALIDTGS+MDEVI+EEFKGTGN E+ L RK+A+KR+FPA+D 
Sbjct: 301 FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY 360

Query: 364 LKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTMDAIEFLIDKLKQTKTNSDFFESM 419
            +SGTRKE+LL  +++LQK+++LR+I+ PMG +DA+EFLI+KL  TKTN DFFE M
Sbjct: 361 NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMM 416