Pairwise Alignments

Query, 264 a.a., Chromosome partitioning protein from Agrobacterium fabrum C58

Subject, 413 a.a., Plasmid replication protein RepA from Variovorax sp. SCN45

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 27/253 (10%)

Query: 9   IAVANQKGGVGKTTTAINLATALAAIGERVLIIDLDPQGNASTGLGIDRKERKLSSYDLL 68
           IAV N KGGV KTTTA+ LA  L+  G RVL ID DPQG+ +T  G+   E ++S  D+ 
Sbjct: 129 IAVGNFKGGVAKTTTAMVLAQGLSLRGHRVLAIDTDPQGSLTTLHGL-LPEAEISE-DMT 186

Query: 69  V------GEHGIAEVAVPTAVPNLDIVPSTMDLLGFEM-----QVANVANRVF-LLRAAM 116
           +       +  I      T    LD+V +   L   E      Q+     R + +L A +
Sbjct: 187 IAPLCDGSQSDIRYAIRSTYWDGLDLVAAAPFLFSAEFALPARQMQEPGARFWDVLNAGL 246

Query: 117 ETPEARGYSYILVDCPPSFNLLTMNAMTAAHSVLVPLQCEFFALEGLSQLLDTVSQIRGS 176
           E+     Y  I++D PPS + +T+NA+ AA+ ++VP+          +Q    ++ + G+
Sbjct: 247 ESVRDL-YDVIVIDTPPSLSYVTINALWAANGIIVPVPPSGLDFASSAQFWSLLADLGGN 305

Query: 177 VNPQ--------LDIQGIVLTMFDARNNLAQQVVSDVRSHLGEKVYHTLIPR-NVRVSEA 227
           ++ Q         +   ++L+  D  +     V   +++  GE      IP+ +V  ++A
Sbjct: 306 LDAQGGDLARKAFEFLHVLLSRVDPSDPATPAVRQWIQATYGEYTLPVEIPKTSVTSNKA 365

Query: 228 PSYGKPAILYDLK 240
             +   A +YD++
Sbjct: 366 AEF---ATVYDVQ 375