Pairwise Alignments

Query, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

Subject, 319 a.a., Fructose ABC transporter, permease component FrcC from Variovorax sp. SCN45

 Score =  215 bits (547), Expect = 1e-60
 Identities = 124/319 (38%), Positives = 183/319 (57%), Gaps = 16/319 (5%)

Query: 24  FAALGSLFALVAV---FSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITGGIDLSV 80
           + ALG   AL+     F+  S+ F T  N   I  QV  + ++ IG T +I+T GIDLS 
Sbjct: 11  WGALGPWLALLGACIFFATQSDRFLTGGNLSLILQQVMVVGVIAIGQTLIILTAGIDLSC 70

Query: 81  GSVLALAGVVAALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIATLGMML 140
           G V+AL G++ +    ELG+P P+ +L GI   +L GL+NGLLVTR KLPPFI TLG + 
Sbjct: 71  GMVMALGGIIMSKFATELGLPAPVAILCGIGVTTLFGLLNGLLVTRIKLPPFIVTLGTLN 130

Query: 141 IARGVALQITGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVILMVVIA 200
           IA  +    + ++ ++ L    G  G G  F   +IG+          + +  +LM+V+ 
Sbjct: 131 IAFAITQLYSSSQTITDLPG--GLTGLGTTF---SIGN--------AEVAWGAVLMLVLY 177

Query: 201 LAVSFMLNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMSRLV 260
               F+L  +  GRHIYAVG+NA+A RL G+   RV    Y+ +G L G+   + ++R  
Sbjct: 178 GLAWFVLRETAAGRHIYAVGNNAEATRLVGIPTQRVLLGVYVAAGVLYGIASLLSVARTG 237

Query: 261 TAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGVSAFTQQ 320
              PN G    LDAI + V+GGTSL GG G + G+ IG  ++G+ RNGL + GVS+  Q 
Sbjct: 238 VGDPNAGQTENLDAITAVVLGGTSLFGGRGIVLGSLIGVLIVGVFRNGLTLMGVSSIYQV 297

Query: 321 IIIGLVILVTVWIDQLRNR 339
           ++ G+++++ V  DQL  R
Sbjct: 298 LVTGVLVILAVTADQLSRR 316



 Score = 23.9 bits (50), Expect = 0.006
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 17  QKDIIQKFAALGSLFALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITGGI 76
           Q+ ++  + A G L+ + ++ S         N G T  L           A   ++ GG 
Sbjct: 211 QRVLLGVYVAAGVLYGIASLLSVARTGVGDPNAGQTENLD----------AITAVVLGGT 260

Query: 77  DLSVGSVLALAGVVAALAV 95
            L  G  + L  ++  L V
Sbjct: 261 SLFGGRGIVLGSLIGVLIV 279