Pairwise Alignments

Query, 442 a.a., carboxy-terminal protease from Agrobacterium fabrum C58

Subject, 438 a.a., peptidase S41 from Pseudomonas simiae WCS417

 Score =  362 bits (928), Expect = e-104
 Identities = 203/431 (47%), Positives = 283/431 (65%), Gaps = 15/431 (3%)

Query: 3   RKVSLLLIGGLMGATAMSVIYSASMPAQAAGPSTYK------ELSIFGDVFERVRAQYVT 56
           R  SL L   L+    ++    A+  A AA  +T K      EL  F +V +R++A YV 
Sbjct: 6   RLTSLALTIALVIGAPLAFADQAAPAAPAATAATTKAPLPLDELRTFAEVMDRIKAAYVE 65

Query: 57  PPDDEKLVENAINGMLSSLDPHSSFMNAKDANDMRTQTKGEFGGLGIEVTMENELVKVIS 116
           P DD+ L+ENAI GMLS+LDPHS+++  +D  +++  T GEFGGLGIEV  E+  +KV+S
Sbjct: 66  PVDDKTLLENAIKGMLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGSEDGNIKVVS 125

Query: 117 PMDDTPASRAGILAGDYISEIDGTPVRGLKLEQAVEKMRGAVKTPIKLTVIRKGADKPLE 176
           P+DDTPAS+AGI AGD+I +I+G P RG  + +AV+KMRG +   I LT++R G + P +
Sbjct: 126 PIDDTPASKAGIQAGDFIVKINGQPTRGQTMTEAVDKMRGKIGQKITLTLVRDGGN-PFD 184

Query: 177 FTVVRDVIAVRAVKSRVEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADKLKGYVLD 236
            T+ R  I V++VKS++     GY+R+  F  KT D++ KA+ K++ D    KL G VLD
Sbjct: 185 VTLTRATILVKSVKSQLLESGYGYIRITQFQVKTGDEVAKALAKLRKD-NGKKLNGIVLD 243

Query: 237 LRLNPGGLLDQAINVSDAFLERGEVVSTRGRNPDETRRFNATAGDLTDGKPVIVLVNGGS 296
           LR NPGG+L  A+ V D F+ +G +V T+GR  +   RF+AT  DL++  P+ VL+NGGS
Sbjct: 244 LRNNPGGVLQSAVEVVDHFITKGLIVYTKGRIANSELRFSATGNDLSENVPLAVLINGGS 303

Query: 297 ASASEIVAGALQDLRRATVVGTRSFGKGSVQTIIPLGEAGALRLTTALYYTPSGKSIQGT 356
           ASASEIVAGALQD +R  ++GT SFGKGSVQT++PL    AL++TTALYYTP+G+SIQ  
Sbjct: 304 ASASEIVAGALQDQKRGVLMGTTSFGKGSVQTVLPLNNERALKITTALYYTPNGRSIQAQ 363

Query: 357 GIEPDIKVEQPLPAELQGRVTAE--GESSLSGHI-KGQSETDEGSGSSAYVPPEAK-DDI 412
           GI PDI+V +   A++   + +E   E+ L GH+  G    D+ + SS    P  + DD 
Sbjct: 364 GIVPDIEVRK---AKITNEIDSEYYKEADLQGHLGNGNGGADQPTDSSKKAKPMPQDDDY 420

Query: 413 QLNYALDLLRG 423
           QL  AL LL+G
Sbjct: 421 QLAQALSLLKG 431