Pairwise Alignments

Query, 335 a.a., C4-dicarboxylate binding protein from Agrobacterium fabrum C58

Subject, 343 a.a., Sialic acid-binding periplasmic protein SiaP from Xanthobacter sp. DMC5

 Score =  140 bits (352), Expect = 6e-38
 Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 13/342 (3%)

Query: 2   RKLLLTTTAIAFAVGAAAPAM-------AEFNSRNIRVSNGINQDHPVGNGIKAMQACLD 54
           R+ L+  +A     GA APA+       A+    + + +N +   HP+    + M A + 
Sbjct: 5   RRTLIKASAATALTGAIAPALFAPTVARAQSAEFSYKYANNLPVTHPMNVRAQEMAAKIK 64

Query: 55  DKSGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGLIPSLGVFDLPFLFAN 114
            ++ G++++  F    LGGD      LRSG  E    S   L  L+P+  +  + F F +
Sbjct: 65  AETKGRVEINIFPSSQLGGDTDMLSQLRSGAIEFFTLSPLILSTLVPNASISGIGFAFPD 124

Query: 115 DKEADAVMDGAFGDMMNKKLEEQGLVNL-AYWENGFRNLSNSKHAVNKWEDFSGLKVRVM 173
                  MDG  G  +  ++ + G+V +   W+NGFR ++ S   +    D  GLK+RV 
Sbjct: 125 YASVWKAMDGDLGTYVRGQISKAGIVAMDKIWDNGFRQITTSTKPIETAADLKGLKIRVP 184

Query: 174 QNNIFLDTFQNLGANATPMAFGEVFSALETNAIDAQENPYVTIDTSKFYEVQKYVTETNH 233
            + ++   F+   +    + F EV++AL+T A+DAQENP   I T+K YEVQKY + TNH
Sbjct: 185 VSPLWTSMFKAFDSAPASLNFAEVYTALQTRAVDAQENPLAIISTAKLYEVQKYCSLTNH 244

Query: 234 AYTPFLFLFSKPIFDSYTPEEQTALRECAVVGRDEERKVIRELNQKSLEKIKAAGLEVNT 293
            +  F FL ++  F+    + +  + +       ++R  +  LN    +++   GL  N 
Sbjct: 245 MWDGFWFLANRRAFEKLPDDLRAIVAKNINEAGLKQRDDVFALNNNLRKELAEKGLTFNE 304

Query: 294 LSPEEQTRIREKSMVVYEKHKAEIGADVVDAVLADLKKIRGQ 335
               +  R + +    Y + K + G    D   A L+K  GQ
Sbjct: 305 -PKVDSFRDQLRKAGFYAEWKGKYG----DEAWATLEKYTGQ 341