Pairwise Alignments

Query, 416 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Agrobacterium fabrum C58

Subject, 371 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) from Acinetobacter radioresistens SK82

 Score =  197 bits (502), Expect = 3e-55
 Identities = 136/397 (34%), Positives = 216/397 (54%), Gaps = 52/397 (13%)

Query: 8   DPKPRRASVAVDVGGVIVGGGAPVVVQSMTNTDTADIDATVRQVAALFQAGSEMVRITVD 67
           +P  RR +  + VG V VGG AP+ +QSMTNT+T D+ ATV Q+      G++++R++V 
Sbjct: 4   NPIKRRPTRKIRVGSVYVGGDAPISIQSMTNTETCDVAATVAQIQRCVDVGADIMRVSVP 63

Query: 68  RDESAAAVPKIRERLLRLGMDVPLIGDFHYIGHKLLADHPACAEALAKYRINPGNVGFKD 127
             E+A A  +IR++     + VPL+ D H+     LA     A+ L   RINPGN+G   
Sbjct: 64  SMEAAKAFGEIRKQ-----VSVPLVADIHFDYKIALAVADFGADCL---RINPGNIG--- 112

Query: 128 KKDKQFGEIVEMAIRYDKPVRIGVNWGSLDQELLTTLMDRNKEQGFPLSARQVTREAIVQ 187
             + +  E+V  A  +D  +RIGVN GSL++++        K+ G P      T +A+++
Sbjct: 113 -SEAKIREVVAAARHHDISMRIGVNAGSLEKDI-------QKKYGEP------TGQALLE 158

Query: 188 SALISAELAEEIGLPRNRIILSAKVSQVQDLIAVYSMLSERSNHALHLGLTEAGMGSKGI 247
           SA+   ++ + +     ++  S K S V   +  Y +LS++ ++ LHLG+TEAG+   G 
Sbjct: 159 SAMRHIDILDRLNFQEFKV--SVKASNVFLTMDAYRLLSQQIDNPLHLGVTEAGVYRTGS 216

Query: 248 VASSAAMGYVLQHGIGDTIRVSLTPEPNGDRTREVQVAQELLQVMGFRQFIPVVAACPGC 307
           V S+ A+G +L  GIGDT+R+SL  EP      E+++  ++L+ +  R       ACP C
Sbjct: 217 VKSAIALGGLLMEGIGDTMRISLAAEPE----EEIKIGFDILKSLSLRSNGINFIACPSC 272

Query: 308 GR---TTSTVFQELAQNIQNDIRKNMPIWREKYPGVEALNVAVMGCIVNGPGESKHADIG 364
            R       V Q L + ++ DIR  M             +V+V+GC VNGPGE+K ADIG
Sbjct: 273 SRQEFNVIKVMQALEERLE-DIRTPM-------------DVSVIGCKVNGPGEAKEADIG 318

Query: 365 ISLPGTGESPAAPVFIDGEKALTLRGPNIAADFEALV 401
           +     G SP + V+ +GEK+  +    +  + E +V
Sbjct: 319 V----VGASPRSLVYRNGEKSHLIDTNQLVDEIETMV 351