Pairwise Alignments

Query, 220 a.a., porin from Agrobacterium fabrum C58

Subject, 344 a.a., Outer membrane porin F from Pseudomonas putida KT2440

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 1/111 (0%)

Query: 106 VLNMPSNITFATDQDQVIPPFYQTLDSVAIVLNKFNRTLIDINGHTDSTGSLQHNQALSE 165
           V+ +  ++ F  D+  V P  Y  + ++A  + ++ +T   + GHTDS G   +NQ LSE
Sbjct: 229 VVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSE 288

Query: 166 RRAASVANYLGAR-GVDQRRISTLGFGPSQPIASNATSDGRAQNRRVEVLI 215
           RRA +V   L  + GV+  R+ ++G+G ++P+A NAT +GRA NRRVE  +
Sbjct: 289 RRANAVKQVLTQQYGVESSRVDSVGYGETRPVADNATEEGRAVNRRVEAQV 339