Pairwise Alignments

Query, 220 a.a., porin from Agrobacterium fabrum C58

Subject, 263 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score = 82.4 bits (202), Expect = 7e-21
 Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 3/137 (2%)

Query: 80  MDGQEAELRAQLQGTGVSVTRRGDSIVLNMPSNITFATDQDQVIPPFYQTLDSVAIVLNK 139
           +D ++A++           T RG  +      ++ F  ++ ++    Y  +  +A  L +
Sbjct: 114 LDARDAQIAKLQDSLNAKQTDRGTLVTFG---DVLFDFNKAELKSNAYPNITKLAQFLQE 170

Query: 140 FNRTLIDINGHTDSTGSLQHNQALSERRAASVANYLGARGVDQRRISTLGFGPSQPIASN 199
                + + G+TDS GS  +NQ LSERRA SV   L   GVD  RI + G+G   P+A N
Sbjct: 171 NPERKVIVEGYTDSVGSANYNQTLSERRANSVRMALVRAGVDPARIVSQGYGKEYPVADN 230

Query: 200 ATSDGRAQNRRVEVLIS 216
           +++ GRAQNRRVEV IS
Sbjct: 231 SSNSGRAQNRRVEVTIS 247