Pairwise Alignments

Query, 220 a.a., porin from Agrobacterium fabrum C58

Subject, 230 a.a., OmpA family protein from Pseudomonas putida KT2440

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 69/200 (34%), Positives = 101/200 (50%), Gaps = 28/200 (14%)

Query: 41  AVVGALGGLAVGG--SPVGRRNAALIGAGIGALAGGAIGNYMDGQE-----AELRAQLQG 93
           A VG +GG A+G   S       AL+G G   LA G    + DG E      + R +  G
Sbjct: 32  AAVGGVGGAALGAIESSSWAGWGALLGGG---LAAGYCWAHGDGDEDGDGVPDSRDKCPG 88

Query: 94  T--GVSVTRRG---------DSIVLNMPS-----NITFATDQDQVIPPFYQTLDSVAIVL 137
           T  GV V   G         + +V+         ++ F  D  ++     + L+++A  L
Sbjct: 89  TPRGVQVDANGCPPEPVAVVEEVVVQKEEVIVIRDVHFEFDSARLTASDKERLNTIATRL 148

Query: 138 NKFNRTL-IDINGHTDSTGSLQHNQALSERRAASVANYLGARGVDQRR-ISTLGFGPSQP 195
            +   +  + ++GHTDS GS  +NQ LSERRA SV +YL   GV +   +S +G G +QP
Sbjct: 149 KQEAPSARLSVSGHTDSVGSDSYNQKLSERRAHSVTDYLVESGVPRSSFVSVVGAGETQP 208

Query: 196 IASNATSDGRAQNRRVEVLI 215
           +A NAT++GRA NRR E+ I
Sbjct: 209 VADNATAEGRAMNRRTEIKI 228