Pairwise Alignments

Query, 220 a.a., porin from Agrobacterium fabrum C58

Subject, 236 a.a., OmpA/MotB domain-containing protein from Pseudomonas putida KT2440

 Score =  197 bits (501), Expect = 1e-55
 Identities = 108/225 (48%), Positives = 140/225 (62%), Gaps = 8/225 (3%)

Query: 2   IKKIAIVALCGTYLSACTTTDPYT------GEQKMSNTAGGAGIGAVVGALGGLAVGGSP 55
           ++++ IVA     ++ C   +PY       G   MS TA   G+GA+ GA+ G A+  + 
Sbjct: 1   MRRLIIVATAAALMTGCAGQNPYDNQGQAQGSTGMSKTAKYGGLGALAGAIAGAAIDHNN 60

Query: 56  VGRRNAALIGAGIGALAGGAIGNYMDGQEAELRAQLQGTGVSVTRRGDSIVLNMPSNITF 115
            G+   ALIGA     A    G Y D QEAELRAQ+  TGV V R+GD I L MP NITF
Sbjct: 61  RGK--GALIGAAAVGAAAAGYGYYADKQEAELRAQMANTGVEVQRQGDQIKLIMPGNITF 118

Query: 116 ATDQDQVIPPFYQTLDSVAIVLNKFNRTLIDINGHTDSTGSLQHNQALSERRAASVANYL 175
           ATD   + P FY  L+++A    +FN+  I++ G TDSTGS QHN  LS+RRA +V+ YL
Sbjct: 119 ATDSANIAPSFYSPLNNLAGSFKQFNQNTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYL 178

Query: 176 GARGVDQRRISTLGFGPSQPIASNATSDGRAQNRRVEVLISPLKG 220
            ++GVD  RIS  G GP QPIASNA ++GRAQNRRVEV + P+ G
Sbjct: 179 TSQGVDASRISVRGMGPDQPIASNADANGRAQNRRVEVNLKPIPG 223