Pairwise Alignments

Query, 541 a.a., ABC transporter, membrane spanning protein (thiamine) from Agrobacterium fabrum C58

Subject, 264 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 69/214 (32%), Positives = 99/214 (46%), Gaps = 28/214 (13%)

Query: 48  YTLRILRFTLYQATLSTLLSIALGLPVALALARRKEFPGRIWIIRLMAVPMGLPVIVGAF 107
           Y   IL FT   ATL+TL+++    P ALA++R   FPGR +   L   P+ +P +V   
Sbjct: 63  YNSLILAFTA--ATLATLIAV----PAALAISRYT-FPGRNFFSALFLSPIIIPHLVLGV 115

Query: 108 GIITIWGRQGVLNSALVFAGADEPFSIYGLSGILIAHVFFNLPLSVRLMLAGLERIPGEY 167
            ++ ++   GV  S                + +++AHV    P  +RL+LA    I    
Sbjct: 116 AMLRLFALMGVNGS---------------FTWLMLAHVVIITPYVLRLVLAAAIGIDRSA 160

Query: 168 WRMAASLGMGPVSVFRFIEWPAVSRLIPGIAGLVFMLCATSFTLVLL--LGGGPAATTLE 225
            + A SLG    ++FR I  P +   +PG+AG   +    SF  V L      PA  TL 
Sbjct: 161 EQAAESLGASRFTLFRQITLPMI---LPGVAGGWLLAFINSFDEVTLSIFVSSPATQTLP 217

Query: 226 VAIYQALRFDFDPQRAIALSVLQIVLTAVLLGLL 259
           V +Y       DP  A A+S L I LTA  + LL
Sbjct: 218 VRMYVYATESIDPMMA-AVSALVIALTAATMILL 250