Pairwise Alignments

Query, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

 Score =  158 bits (400), Expect = 3e-43
 Identities = 115/421 (27%), Positives = 194/421 (46%), Gaps = 53/421 (12%)

Query: 8   GTTNSSILRHSAAVVVLGLGLLVGMGGWAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGI 67
           G  + ++ R    + +  L +L     WAA+ ++      TG+V+     + IQ   GGI
Sbjct: 13  GQDDQAVFRAGRIITLCAL-MLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGI 71

Query: 68  VSEINVVEGDRVAAGQILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAEEPSFTVT 127
           V++++V EGD V  GQ+L +L  T   +++   E       + +ARL+AE+  +P     
Sbjct: 72  VAQMSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKP----- 126

Query: 128 EDLTALTSSKSAKTFIDSEQNLFNSRRNALIGMKKQLATRKLQLADEARGLDVQVEATEN 187
             LT   S + +   ID+E  L+ +RR                     RGL+  +   ++
Sbjct: 127 --LTFPESLRDSPDLIDAETALYQTRR---------------------RGLEQTLAGIQD 163

Query: 188 ELAIVKEDVSKTDELLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGKLSELDLQ 247
            L +V+ ++  T+ L K G  +   +  L RQ S                     EL+L+
Sbjct: 164 SLQLVRSELKITENLAKMGASSRVEVIRLNRQRS---------------------ELELK 202

Query: 248 LLQLDEDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNING 307
             +   D      ++L    A      E +    D L RL +RSP+ G +  + V+ + G
Sbjct: 203 ANEARSDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGG 262

Query: 308 VIQPGEVLMLVVPDKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLSAEVAVV 367
           V+QPG  +M +VP  + L IE  I PRDI  I+  Q   V+ +A++ S    L  +V  +
Sbjct: 263 VVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGI 322

Query: 368 APD-LQTDSRTGTSYYVLRIRPNKAGMGHLPGGK--LYPGMPAEVFIQTSERSVLSYFVK 424
           +PD LQ + +    YY + IR  +  + +  G +  + PGM A V I+T E+++L Y +K
Sbjct: 323 SPDTLQDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIK 382

Query: 425 P 425
           P
Sbjct: 383 P 383