Pairwise Alignments

Query, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

 Score =  330 bits (846), Expect = 5e-95
 Identities = 176/419 (42%), Positives = 256/419 (61%), Gaps = 3/419 (0%)

Query: 21  VVVLGLGLLV---GMGGWAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGIVSEINVVEGD 77
           ++V GLG L      GGWA   ++ GAV+A G +VVE + KK+QH  GG+VSE+ V +GD
Sbjct: 15  LLVGGLGFLTLTGVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGD 74

Query: 78  RVAAGQILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAEEPSFTVTEDLTALTSSK 137
           RV AG +++R+ AT+ +ANL+I+  +L Q  +R+ARL  E     S    + L       
Sbjct: 75  RVKAGDVVMRIDATMTRANLAIVVKSLDQFTARKARLEGERDRAASVVFPQSLRDRAGDA 134

Query: 138 SAKTFIDSEQNLFNSRRNALIGMKKQLATRKLQLADEARGLDVQVEATENELAIVKEDVS 197
                +++EQ L+  RR      K+QL  R  QL DE  GL+ +  A   E  +V E++ 
Sbjct: 135 EVLAMMNAEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELI 194

Query: 198 KTDELLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGKLSELDLQLLQLDEDRKS 257
           +   L ++GL+   RL+ L+RQ ++++G  G+  A  A    K+SE  LQ+LQ+DE    
Sbjct: 195 RFRSLQERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSE 254

Query: 258 EVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPGEVLML 317
           EV  DL  ++A + EY ER  A  DQL R+DI +P  G ++QL+VH + GVI PGE +M+
Sbjct: 255 EVGSDLREMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMM 314

Query: 318 VVPDKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLSAEVAVVAPDLQTDSRT 377
           +VP+ D L +EA + P+DIDQIY GQ   +RF+AFNQ TTP+++  V  ++ D+  D RT
Sbjct: 315 IVPEVDKLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRT 374

Query: 378 GTSYYVLRIRPNKAGMGHLPGGKLYPGMPAEVFIQTSERSVLSYFVKPFQDRLKKTFVQ 436
           G SYY++R+  ++  +  L    L PGMP E FI T ERSVLSYF+KP  D+  +TF Q
Sbjct: 375 GASYYLVRVATSQEQIKRLGEFSLMPGMPVEAFITTGERSVLSYFLKPLLDQANRTFRQ 433